EY756440

Overview
NameEY756440
Unique NameEY756440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_LITVA (Histone H4 OS=Litopenaeus vannamei PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.973e-35
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKR   TLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRXXXTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_APIME (Histone H4 OS=Apis mellifera PE=3 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 2.973e-35
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VL DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEH +RKTVTAMDVVYALK QGRTLYGF
Sbjct:   22 VLGDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHTKRKTVTAMDVVYALKIQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_TRICD (Histone H4 OS=Trichogramma cacoeciae PE=3 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 3.883e-35
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRIS LIYEETRGVLK+FLENVIRDAVTYTEHA+  TVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISSLIYEETRGVLKVFLENVIRDAVTYTEHAKIPTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_NEUCR (Histone H4 OS=Neurospora crassa GN=hhf-1 PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.476e-34
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRIS +IYEETRGVLK FLE VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_ASPOR (Histone H4 OS=Aspergillus oryzae GN=hhfA PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.476e-34
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRIS +IYEETRGVLK FLE VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_ASPFU (Histone H4 OS=Aspergillus fumigatus GN=hhfA PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.476e-34
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRIS +IYEETRGVLK FLE VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H42_PENFN (Histone H4.2 OS=Penicillium funiculosum GN=H4.2 PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.476e-34
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRIS +IYEETRGVLK FLE+VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKSFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H42_EMENI (Histone H4.2 OS=Emericella nidulans GN=hhfB PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.476e-34
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRIS +IYEETRGVLK FLE+VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKSFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H41_PENFN (Histone H4.1 OS=Penicillium funiculosum GN=H4.1 PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.476e-34
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRIS +IYEETRGVLK FLE VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H41_EMENI (Histone H4.1 OS=Emericella nidulans GN=hhfA PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.476e-34
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRIS +IYEETRGVLK FLE VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGF 101
The following BLAST results are available for this feature:
BLAST of EY756440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_LITVA2.973e-3593.75Histone H4 OS=Litopenaeus vannamei PE=1 SV=2[more]
H4_APIME2.973e-3593.75Histone H4 OS=Apis mellifera PE=3 SV=3[more]
H4_TRICD3.883e-3593.75Histone H4 OS=Trichogramma cacoeciae PE=3 SV=3[more]
H4_NEUCR1.476e-3490.00Histone H4 OS=Neurospora crassa GN=hhf-1 PE=3 SV=2[more]
H4_ASPOR1.476e-3490.00Histone H4 OS=Aspergillus oryzae GN=hhfA PE=3 SV=3[more]
H4_ASPFU1.476e-3490.00Histone H4 OS=Aspergillus fumigatus GN=hhfA PE=3 S... [more]
H42_PENFN1.476e-3490.00Histone H4.2 OS=Penicillium funiculosum GN=H4.2 PE... [more]
H42_EMENI1.476e-3490.00Histone H4.2 OS=Emericella nidulans GN=hhfB PE=3 S... [more]
H41_PENFN1.476e-3490.00Histone H4.1 OS=Penicillium funiculosum GN=H4.1 PE... [more]
H41_EMENI1.476e-3490.00Histone H4.1 OS=Emericella nidulans GN=hhfA PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-F05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756440 ID=EY756440; Name=EY756440; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGAGCAAATAAAAGAAGCATAAAATTAAAGAACTGAAAAGA
GAGAAAAGGAAAGCAGAAGAGAAATGTCAGGAAGAGGAAAGGGAGGCAAA
GGATTAGGAAAGGGAGGAGCGAAGAGGCACCGCAAGGTGCTGAGGGATAA
CATTCAGGGGATCACAAAGCCGGCTATCCGGCGGCTGGCGAGGCGTGGCG
GAGTCAAGCGTATCAGCGGTCTGATTTACGAGGAGACTCGCGGGGTTTTA
AAGATCTTTTTGGAGAACGTGATTCGTGATGCTGTGACTTACACTGAGCA
CGCTCGTCGTAAGACTGTCACCGCCATGGATGTTGTTTATGCTTTGAAGA
GGCAGGGCAGGACCCTTTACGGTTTTCGGTGGGTAATTTAAGGNTTTCTT
AATTTTTATGTTTTGAATGCTTATGGAGATCTGATGACTTTGGAATTTGG
GATGAAATTTGGCCTTCAAAGGAATTTTATGTTAATGTTGCTAAANNAAA
AANNANNANAAAANAAANNNNNAANNNNNGGGGGGGGGCCGCTTCAAAGA
GACCAACTTTACTACGGGGGGTGGGGAACGATAAATCTTTCAAAAGGGGC
CCAAATTTAATTCTGGGGGGGCGGTTTTAAAAGCGGGGGATGGGAGAACC
CGGGGGGTCACCCATTTAATCCCTTGGGGCACACCCCCTTTTCCCCGGGG
GGGGAAAAAAAAAAAGAGCCCCCCCAATTCCCCCCTTCAAAAATGGGCCC
CCTTAGGGGAGAAGAGGCGCCCCCTTTGGGGGGATTATTTAAGGGGGGGG
GGGGGGGTTCCCCCGGGGCCCCTCCCCTCCCTCCCC
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