EY756432

Overview
NameEY756432
Unique NameEY756432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: ACSL5_MOUSE (Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.259e-23
Identity = 70/216 (32.41%), Postives = 110/216 (50.93%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVSAVMTIVPDL---GSKDVYLAYLPLAHVLELAAENLIAGVGSAIGY--GTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVFSKVRAILGGRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAGGTFSEVDDSSVG 644
            TG PKG M+TH NV++ ++A +  +  +    S DV ++YLPLAH+ E   + ++   G  IG+  G    L D           D   L+PTV  +VP +L+RV D V+   +AK  L K L +LA   + + +             LW+ LVFSK++  LGG++R +++G AP+S     F    +G  + + YG TE   G + +   D + G
Sbjct:  265 TGDPKGAMLTHENVVSNMAAFLKFLEPIFQPTSDDVTISYLPLAHMFERLVQGILFSCGGKIGFFQGDIRLLPD-----------DMKALKPTVFPTVPRLLNRVYDKVQN--EAKTPLKKFLLNLAIISKFNEVKNGIIR----RDSLWDKLVFSKIQGSLGGKVRLMITGAAPISTPVLTFFRAAMGCWVFEAYGQTECTGGCSITSPGDWTAG 463          
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.757e-23
Identity = 69/216 (31.94%), Postives = 108/216 (50.00%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVSAVMTIVPDLGSK---DVYLAYLPLAHVLELAAENLIAGVGSAIGY--GTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVFSKVRAILGGRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAGGTFSEVDDSSVG 644
            TG PKG M+TH N+++  SA +    +  +    D  +++LPLAH+ E   E ++   G+ IG+  G    L D           D  VL+PTV   VP +L+R+ D +  + +    L + L D A  R+ + +             LW+ L+F KV++ LGGR+R +++G AP+SA    F+   LG    +GYG TE  AG   +   D + G
Sbjct:  280 TGNPKGAMVTHRNIVSDCSAFVKATENTVNPCPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMD-----------DLKVLQPTVFPVVPRLLNRMFDRIFGQANTT--LKRWLLDFASKRKEAELRSGIIR----NNSLWDRLIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCLTMPGDWTAG 478          

HSP 2 Score: 29.261 bits (64), Expect = 3.757e-23
Identity = 11/24 (45.83%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  649 VGAPLPCSXHKLIDGPEGGYLTSD 720
            VGAP+PC+  KL+D  E  Y+ ++
Sbjct:  480 VGAPMPCNLIKLVDVEEMNYMAAE 503          
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: ACSL5_HUMAN (Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapiens GN=ACSL5 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.077e-22
Identity = 67/216 (31.02%), Postives = 108/216 (50.00%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVSAVMTIVP---DLGSKDVYLAYLPLAHVLELAAENLIAGVGSAIGY--GTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVFSKVRAILGGRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAGGTFSEVDDSSVG 644
            TG PKG M+TH N+++  +A +  V    +    DV ++YLPLAH+ E   + ++   G+ +G+  G    L D           D   L+PT+  +VP +L+R+ D V+   +AK  L K L  LA + +   +              W+ L+F+K++  LGGR+R I++G AP+S     F    +G  + + YG TE   G TF+   D + G
Sbjct:  265 TGDPKGAMITHQNIVSNAAAFLKCVEHAYEPTPDDVAISYLPLAHMFERIVQAVVYSCGARVGFFQGDIRLLAD-----------DMKTLKPTLFPAVPRLLNRIYDKVQN--EAKTPLKKFLLKLAVSSKFKELQKGIIR----HDSFWDKLIFAKIQDSLGGRVRVIVTGAAPMSTSVMTFFRAAMGCQVYEAYGQTECTGGCTFTLPGDWTSG 463          

HSP 2 Score: 22.3274 bits (46), Expect = 1.077e-22
Identity = 13/36 (36.11%), Postives = 18/36 (50.00%), Query Frame = 1
Query:  649 VGAPLPCSXHKLIDGPEGGYLTSDSPMARGGIVIAG 756
            VG PL C+  KL D  +  Y T ++    G + I G
Sbjct:  465 VGVPLACNYVKLEDVADMNYFTVNN---EGEVCIKG 497          
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.792e-22
Identity = 67/216 (31.02%), Postives = 106/216 (49.07%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVSAVMTIVPDL---GSKDVYLAYLPLAHVLELAAENLIAGVGSAIGY--GTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVFSKVRAILGGRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAGGTFSEVDDSSVG 644
            TG PKG M+TH N++   S  +           +DV +++LPLAH+ E   E ++   G+ IG+  G    L D           D  VL+PT+   VP +L+R+ D +  +  A   + + L D A  R+ + +             LW+ L+F K+++ LGG++R +++G AP+SA    F+   LG    +GYG TE  AG   S   D + G
Sbjct:  281 TGNPKGAMVTHQNIMNDCSGFIKATESAFIASPEDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRLLMD-----------DLKVLQPTIFPVVPRLLNRMFDRIFGQ--ANTSVKRWLLDFASKRKEAELRSGIVR----NNSLWDKLIFHKIQSSLGGKVRLMITGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCLSLPGDWTAG 479          

HSP 2 Score: 26.1794 bits (56), Expect = 6.792e-22
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  649 VGAPLPCSXHKLIDGPEGGY 708
            VGAP+PC+  KL+D  +  Y
Sbjct:  481 VGAPMPCNYIKLVDVEDMNY 500          
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: LCF2_YEAST (Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyces cerevisiae GN=FAA2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20
Identity = 73/223 (32.74%), Postives = 112/223 (50.22%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVS---AVMTIVPDLGSKDVY-LAYLPLAHVLELAAENLIAGVGSAIGYGTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVF-----SKVRAILG-GRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAGGTFSEVDDSSVGXC 650
            TGLPKGV M+H N+ + ++   +   I PD  ++ +Y + +LPLAH+ E         +G  IG+   L   D +  ++     D  +L+P  +A VP IL R   G++  +D K  + + + +      L + +  +    G +K + N LV+      K+R  LG     FI++G AP+S DT  F+   L   I QGYGLTET AG   SE  +  VG C
Sbjct:  304 TGLPKGVEMSHRNIASGIAFAFSTFRIPPDKRNQQLYDMCFLPLAHIFERMVIAYDLAIGFGIGF---LHKPDPTVLVE-----DLKILKPYAVALVPRILTRFEAGIKNALD-KSTVQRNVANTI----LDSKSARFTARGGPDKSIMNFLVYHRVLIDKIRDSLGLSNNSFIITGSAPISKDTLLFLRSALDIGIRQGYGLTETFAGVCLSEPFEKDVGSC 513          
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: ACBG2_HUMAN (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo sapiens GN=ACSBG2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15
Identity = 65/216 (30.09%), Postives = 100/216 (46.30%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVSAVMTIVPDLGSKDVYLAYLPLAHVLELAAENLIAGVGSAIGYGTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWG--LEKLLWNLLVFSKVRAILG-GRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAGGTFSEVDDSSVGXC 650
            TG+PKGVM++H N+     AV          +  ++YLPL+H+   AA+ +   V   IG    LT    +  +K         ++PTV   VP I +++ + V+K      GL KK F  A        +    G +   +   +   LVFSKV+  LG       +SG APL+ +T  F  + L  PIG+ YGL+E+    T S  ++  +  C
Sbjct:  234 TGIPKGVMLSHDNITWIAGAVTKDFKLTDKHETVVSYLPLSHI---AAQMMDIWVPIKIG---ALTYFAQADALKGTLVSTLKEVKPTVFIGVPQIWEKIHEMVKKNSAKSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFISGTAPLNQETAEFF-LSLDIPIGELYGLSESSGPHTISNQNNYRLLSC 442          
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: ACBG2_RAT (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus norvegicus GN=Acsbg2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.270e-14
Identity = 61/205 (29.76%), Postives = 97/205 (47.32%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVSAV---MTIVPDLGSKDVYLAYLPLAHVLELAAENLIAGVGSAIGYGTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWG--LEKLLWNLLVFSKVRAILG-GRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAG 608
            TG PKGVM++H N+  T  A+   + ++   G +D  ++YLPL+H+   AA+ +   +   +G    LT       ++         ++PT    VP + ++++D +++ V     L KK F  A    L        G     +   +   LVF+KVR  LG        SG +PLS D   F  + L  PIG+ YG+TE C+G
Sbjct:  231 TGSPKGVMLSHDNITWTAGAMAREIELIHVSGKQDTIVSYLPLSHI---AAQLMDIWIPIKVGV---LTFFAQPDALRGTLVYTLQEVKPTYFLGVPRVWEKMQDTIKENVAKSSNLRKKAFAWAKMLGLKVNTKKMLGKRDIPMNYRMAKALVFTKVRTSLGLDNCHTFFSGASPLSQDVSEFF-LSLDIPIGEIYGMTE-CSG 427          
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: LCFH_HAEIN (Putative long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=HI0002 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 64/203 (31.53%), Postives = 98/203 (48.28%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVSAVMTIVPDLGSKDVYLAYLPLAHVLELAAENLIAGVGSAIGYGTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARR-----LSAINGSWFGAWGLEKLLWNLLVFSKVRAILGGRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCA 605
            TG PKGVM+ + N LA       +  ++  +D+ L++LP +H+ E A    I   G+ + Y     L DT+      T+     +RPT+M +VP   +++   V  KV     L + +F  A +       L A N +       +  L + LV SK+R +LGGRI+ +  GGA L      F +  +G  I  GYG+TET A
Sbjct:  197 TGEPKGVMLDYAN-LAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCY-----LEDTNQVRSALTE-----IRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKYFDLRANNKAIPFLLKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH-AIGINIKLGYGMTETTA 387          
BLAST of EY756432 vs. ExPASy Swiss-Prot
Match: ACBG2_MOUSE (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Mus musculus GN=Acsbg2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12
Identity = 61/205 (29.76%), Postives = 95/205 (46.34%), Query Frame = 3
Query:   12 TGLPKGVMMTHGNVLATVSAV---MTIVPDLGSKDVYLAYLPLAHVLELAAENLIAGVGSAIGYGTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWG--LEKLLWNLLVFSKVRAILG-GRIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAG 608
            TG PKGV+++H N+  T  A+   M I    G ++  ++YLPL+H+   AA+     +   IG    LT       ++         ++PT+   VP I ++++D +++ V     L KK F  A    L        G     +   +   LVF+KVR  LG        S  +PLS D   F  + L  PIG+ YG++E C+G
Sbjct:  231 TGTPKGVLLSHDNITWTAGAMSQEMEINRVSGKQNTIVSYLPLSHI---AAQLTDIWIPIKIG---ALTFFAQPDALRGTLVYTLQEVKPTLFMGVPRIWEKMQDTIKENVARSSRLRKKAFAWAKMLGLKVNTKRMLGKRDIPMNYRMAKALVFAKVRTSLGLDNCHAFFSSASPLSQDVSEFF-LSLDIPIGEIYGMSE-CSG 427          
The following BLAST results are available for this feature:
BLAST of EY756432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ACSL5_MOUSE2.259e-2332.41Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculu... [more]
ACSL1_HUMAN3.757e-2331.94Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]
ACSL5_HUMAN1.077e-2231.02Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapien... [more]
ACSL1_RAT6.792e-2231.02Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
LCF2_YEAST8.884e-2032.74Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyc... [more]
ACBG2_HUMAN6.588e-1530.09Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo s... [more]
ACBG2_RAT4.270e-1429.76Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus... [more]
LCFH_HAEIN5.220e-1231.53Putative long-chain-fatty-acid--CoA ligase OS=Haem... [more]
ACBG2_MOUSE6.818e-1229.76Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-E07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756432 ID=EY756432; Name=EY756432; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGACTGGTTTGCCCAAGGGTGTAATGATGACACATGGCAAT
GTCTTAGCCACAGTTTCTGCAGTCATGACAATTGTTCCTGACCTGGGAAG
CAAGGATGTTTATTTGGCATACCTACCTCTGGCTCATGTTCTGGAATTAG
CAGCTGAGAACCTAATTGCTGGTGTTGGAAGCGCAATAGGATATGGTACC
CCTTTGACTCTCACTGATACCTCAAGCAAAATAAAAAGGGGTACCCAGGG
GGATGCATCTGTTTTGAGGCCAACTGTGATGGCCTCTGTCCCAGCAATAC
TCGACCGTGTTCGAGATGGTGTACGCAAGAAAGTAGATGCAAAAGGTGGA
CTTTCCAAGAAATTGTTTGACTTGGCATATGCTCGCAGACTGTCTGCAAT
AAATGGTAGCTGGTTTGGGGCATGGGGCCTGGAAAAACTTTTGTGGAACC
TCCTTGTGTTTTCGAAAGTTCGTGCAATTCTAGGAGGTCGGATCCGGTTT
ATACTTTCTGGAGGTGCTCCACTTTCTGCTGATACTCAAAGATTTATCAA
CATTTGCCTTGGTGCTCCAATAGGGCAAGGGTATGGGCTTACTGAGACGT
GTGCTGGGGGTACTTTTTCTGAGGTGGATGATTCATCTGTTGGTCNGTGT
CGGGGCTCCACTTCCTTGCTCANTTCATAAATTAATAGATGGGCCTGAAG
GTGGTTATTTAACTAGTGATTCGCCAATGGCACGTGGGGGAATAGTCATT
GCTGGTCAAATGTCCAGTTGGATATTCAAAATGAAGAGAAACAAAGAAGT
GACAAGGTGATGCAAAGGGATTGAGGGGTCTATACGGTGATGTGGAACAG
GTCTGCTGATGGTGCCTGGAATAATGACCGAAAAAGATTGTCAGCTCACC
TGGAAA
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