EY756427

Overview
NameEY756427
Unique NameEY756427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756427 vs. ExPASy Swiss-Prot
Match: E13L4_ARATH (Glucan endo-1,3-beta-glucosidase-like protein At1g69295 OS=Arabidopsis thaliana GN=At1g69295 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11
Identity = 34/91 (37.36%), Postives = 52/91 (57.14%), Query Frame = 1 
Query:  259 TNQTYCTARDGADPKMLQAALDWACGPGKVDCSGLLQGQPCYQPDNVIAHATYAFDTYYHQMRKDPAACNFNGVAAITTSDPSHGSCIFPG 531
            +N  YC  ++G + ++LQ A+D+ACG G  DC+ +     CYQP+ V  H   A ++YY +     A C+FNG A+ +T+ PS  S    G
Sbjct:   17 SNAAYCLCKEGNE-QVLQKAIDYACGNG-ADCTQIQPTGACYQPNTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTG 105
[Close]
BLAST of EY756427 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11
Identity = 54/176 (30.68%), Postives = 75/176 (42.61%), Query Frame = 1 
Query:   19 DATLENANTYNSNLIRHVLNQTGTPKHPGIGVSTYIYELYNED--NKPGPLSEKNWGLFDANGDPVYILHLTGSGSVLANDTTN--QTYCTARDGADPKMLQAALDWACGPGKVDCSGLLQGQPCYQ---PDNVIAHATYAFDTYYHQMRKDPAACNFNGVAAITTSDPSHGSCIF 525
            +AT   A  +   LI H+  +T +   P   V TYI  L +ED  N      E++WG+F  +G   Y         V A +       +C   +  D     A    AC     DC+ +L G  C     P NV    +YAF++ Y Q      +CNF G+  ITT DPS  +C F
Sbjct:  277 NATSLTAEAFFKGLIVHLEKKTASLPRPP--VETYIESLLDEDQRNLSAGNFERHWGVFTFDGQAKYNFSFNHKNQVNAQNVQYLPPKWCVVNNNKDLSNASARALEACAVA--DCTSILPGGSCSGIRWPGNV----SYAFNSLYQQNDHSAESCNFGGLGLITTVDPSEDNCRF 444
The following BLAST results are available for this feature:
BLAST of EY756427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
E13L4_ARATH5.965e-1137.36Glucan endo-1,3-beta-glucosidase-like protein At1g... [more]
E139_ARATH5.965e-1130.68Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756427 ID=EY756427; Name=EY756427; organism=Citrus sinensis; type=EST; length=928bp
CCACGCGTCCGCGAGCCAGATGCAACTCTAGAAAATGCCAACACTTACAA
CAGCAATTTGATAAGGCATGTGCTAAACCAAACTGGAACTCCCAAACATC
CTGGAATTGGTGTTAGTACTTACATTTATGAGCTCTATAATGAGGATAAT
AAGCCAGGACCACTCTCTGAGAAGAATTGGGGACTATTTGATGCAAATGG
AGATCCTGTTTACATATTACACTTGACAGGGTCAGGATCCGTGTTAGCAA
ATGATACTACAAACCAAACTTATTGCACTGCAAGGGACGGTGCTGATCCA
AAGATGCTGCAAGCTGCTCTAGATTGGGCTTGTGGACCAGGAAAGGTTGA
TTGCTCAGGTTTGTTGCAGGGACAACCATGCTATCAGCCCGACAATGTGA
TTGCACATGCAACTTATGCTTTTGACACTTACTACCATCAAATGCGAAAG
GATCCTGCAGCTTGTAACTTCAATGGGGTGGCTGCAATCACCACCTCGGA
TCCAAGTCATGGTTCTTGTATATTTCCGGGAAAGCTCGGCAAGAATGGCA
CCATGGCGAACATCACAGCACCATCTCTGAACTCAACAATTTCGGATTCT
TCTGCCTACAAGATTTACGGCAGCAGTTCCTTAAGGAGCATCTTAACAGT
AATCAGACTTCTAGGCTGGGGGGGTTGTTTTTCTCTAGCTAGAATGTTAT
GTGTTCNAAACATTTACCCGCTCATTAAAATTTTCAAGACAGNNTGGGGG
GTTGGAGGGAGGGGAGATTTTTGCATCCCTCAAAAAAGGGGTGGGGGGGG
GTGGGGGCCCATCAATTTTGACAAAAAAACCTAAAGGGCGTCATCTGCTG
GGCTTCATTAAATAGGGTTAAAAAAAAAAAAAAAAAAAAGGGCGGCGCTC
AAAGGATCCAATTTACTACCGGGATGGA
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