EY756426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_METC4 (50S ribosomal protein L20 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rplT PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.541e-28 Identity = 56/104 (53.85%), Postives = 79/104 (75.96%), Query Frame = 1 Query: 85 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDISRNAFP 396 K++ K AKG+ GR KN IRIA++ VEK LQY+YRDR+NKKR R+LWIQR+NA R+HG+ Y F++ L + I+++RK LSEL++HEP F A+V +++A P Sbjct: 15 KKVLKAAKGYYGRRKNTIRIAKQAVEKGLQYAYRDRKNKKRTFRALWIQRLNAAVREHGLTYSRFINALAQSGIEVDRKALSELAIHEPAAFAAVVAKAKSALP 118
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_RICPR (50S ribosomal protein L20 OS=Rickettsia prowazekii GN=rplT PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.126e-27 Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 1 Query: 64 KRERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDISR 384 K + K+I KLAKG+RGRA NC R+A E+VEK LQY+YRDRRN+KRD R LWIQRINA R+HG+ Y FM L K I ++RKVL+EL+++ F ++V S+ Sbjct: 8 KISKKRHKKILKLAKGYRGRANNCFRVAIEKVEKGLQYAYRDRRNRKRDFRGLWIQRINAAVREHGLIYSQFMGALKKAGINIDRKVLAELAVNNNDGFASIVQQSK 114
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_MAGSM (50S ribosomal protein L20 OS=Magnetococcus sp. (strain MC-1) GN=rplT PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.126e-27 Identity = 58/102 (56.86%), Postives = 78/102 (76.47%), Query Frame = 1 Query: 85 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDISRNA 390 K++ K AKG+ GR +C RIA+++VEK LQY+YRDR+N KR+MR LWI RINA TR HG++Y FM+GL K I+L+RKVLSEL++ EP F LV+ ++ A Sbjct: 15 KKVLKAAKGYTGRNNSCFRIAKQKVEKGLQYAYRDRKNLKREMRRLWIARINAATRLHGMSYSQFMNGLNKAGIELDRKVLSELAISEPESFGTLVEQAKAA 116
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_RICCN (50S ribosomal protein L20 OS=Rickettsia conorii GN=rplT PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.626e-27 Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 1 Query: 64 KRERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 K + K+I KLAKG+RGRA +C R+A E+VEKALQY+YRDRRN+KRD R LWIQRINA R+HG+ Y FM L K I ++RKVL+EL+++ F ++V+ Sbjct: 8 KISKNRHKKILKLAKGYRGRANSCFRVAIEKVEKALQYAYRDRRNRKRDFRGLWIQRINAAVREHGLVYSQFMGALKKTEIDIDRKVLAELAVNNSDGFVSIVE 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_RICAE (50S ribosomal protein L20 OS=Rickettsia africae (strain ESF-5) GN=rplT PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.626e-27 Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 1 Query: 64 KRERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 K + K+I KLAKG+RGRA +C R+A E+VEKALQY+YRDRRN+KRD R LWIQRINA R+HG+ Y FM L K I ++RKVL+EL+++ F ++V+ Sbjct: 8 KISKNRHKKILKLAKGYRGRANSCFRVAIEKVEKALQYAYRDRRNRKRDFRGLWIQRINAAVREHGLVYSQFMGALKKTEIDIDRKVLAELAVNNSDGFVSIVE 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_RICRS (50S ribosomal protein L20 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rplT PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.735e-27 Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 1 Query: 64 KRERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 K + K+I KLAKG+RGRA +C R+A E+VEKALQY+YRDRRN+KRD R LWIQRINA R+HG+ Y FM L K I ++RKVL+EL+++ F ++V+ Sbjct: 8 KISKNRHKKILKLAKGYRGRANSCFRVAIEKVEKALQYAYRDRRNRKRDFRGLWIQRINAAVREHGLVYSQFMGALKKTEIAIDRKVLAELAVNNSDGFVSIVE 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_RICRO (50S ribosomal protein L20 OS=Rickettsia rickettsii (strain Iowa) GN=rplT PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.735e-27 Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 1 Query: 64 KRERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 K + K+I KLAKG+RGRA +C R+A E+VEKALQY+YRDRRN+KRD R LWIQRINA R+HG+ Y FM L K I ++RKVL+EL+++ F ++V+ Sbjct: 8 KISKNRHKKILKLAKGYRGRANSCFRVAIEKVEKALQYAYRDRRNRKRDFRGLWIQRINAAVREHGLVYSQFMGALKKTEIAIDRKVLAELAVNNSDGFVSIVE 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_RICM5 (50S ribosomal protein L20 OS=Rickettsia massiliae (strain Mtu5) GN=rplT PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.735e-27 Identity = 60/109 (55.05%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 52 RIKEKRERMNK-KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 R+K + N+ K+I KLAKG+RGRA +C R+A E+VEKALQY+YRDRRN+KRD R LWIQRINA R+H + Y FM L K I +NRKVL+EL+++ F ++V+ Sbjct: 3 RVKSGKISKNRHKKILKLAKGYRGRANSCFRVAIEKVEKALQYAYRDRRNRKRDFRGLWIQRINAAVREHELVYSQFMGALKKAGIDINRKVLAELAVNNSDGFVSIVE 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_RICFE (50S ribosomal protein L20 OS=Rickettsia felis GN=rplT PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.735e-27 Identity = 57/104 (54.81%), Postives = 77/104 (74.04%), Query Frame = 1 Query: 64 KRERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 K + K+I KLAKG+RGRA +C R+A E+VEKALQY+YRDRRN+KRD R LWIQRINA R+HG+ Y FM L K I ++RKVL+EL+++ F ++++ Sbjct: 8 KISKNRHKKILKLAKGYRGRANSCFRVAIEKVEKALQYAYRDRRNRKRDFRGLWIQRINAAVREHGLVYSQFMGALKKAEIDIDRKVLAELAVNNSDGFASIIE 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_PARL1 (50S ribosomal protein L20 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplT PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.735e-27 Identity = 57/102 (55.88%), Postives = 78/102 (76.47%), Query Frame = 1 Query: 85 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDISRNA 390 ++I K AKG+ GR KN R A + VEKA QY+YRDRR +KR+ R+LWIQRINAG R+HG+ Y F+ GL K I+++RKVLS++++HEP FKALV+ ++ A Sbjct: 15 RKIIKKAKGYYGRRKNAFRTANQAVEKAGQYAYRDRRTRKRNFRALWIQRINAGVREHGLTYSRFIDGLAKAGIEVDRKVLSDIAIHEPEAFKALVEQAQAA 116 The following BLAST results are available for this feature:
BLAST of EY756426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756426 ID=EY756426; Name=EY756426; organism=Citrus sinensis; type=EST; length=952bpback to top |