EY756426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_NEIMF (50S ribosomal protein L20 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rplT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.900e-24 Identity = 52/106 (49.06%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 73 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDISRNA 390 R ++IF LAKG+RGR KN R+A++ V KA QY+YRDRR +KR R LWI RINAG R++G++Y FM+GL + +I+++RKVL++L++ + F LV+ +++A Sbjct: 11 RARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQYAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFDKAAFAQLVEKAKSA 116
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_METPP (50S ribosomal protein L20 OS=Methylibium petroleiphilum (strain PM1) GN=rplT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.900e-24 Identity = 52/101 (51.49%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 73 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 R K++ +LAKGFRGR KN RIA++ V KA QY+YRDRRN+KR R LWI RINA +R HG+ Y F+ G+ K I ++RK+L+EL++++P F ++V+ Sbjct: 11 RARHKKVLELAKGFRGRRKNVYRIAKQAVMKAGQYAYRDRRNRKRVFRRLWIARINAASRSHGITYSRFIAGIKKAAIDIDRKMLAELAVNDPAAFGSIVE 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_BARHE (50S ribosomal protein L20 OS=Bartonella henselae GN=rplT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.900e-24 Identity = 52/102 (50.98%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 85 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDISRNA 390 K++ K A+GF GR KN IR A+ V+++ QY+YRDR+N+KR R+LWIQRINA R G+ YG F+ GL K I+++RKVLS++++HE F ALV ++ A Sbjct: 15 KKVLKQAEGFYGRRKNTIRAAKAAVDRSKQYAYRDRKNRKRTFRALWIQRINAAVRAEGLTYGRFIDGLSKAGIEIDRKVLSDIAIHESAAFSALVASAKKA 116
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_ANAMM (50S ribosomal protein L20 OS=Anaplasma marginale (strain St. Maries) GN=rplT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.900e-24 Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 1 Query: 73 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALV 372 R K++ LAKG+RGR+KNC R A +R+EKAL Y+YRDRRN+KRD R LWI RINA RQ G+ Y M G+ I+LNRK+L+E+++++ F+ +V Sbjct: 11 RARHKKVVALAKGYRGRSKNCYRAALQRLEKALVYAYRDRRNRKRDFRRLWIVRINAAARQWGIKYSQLMKGMALCGIELNRKMLAEMAVNDKAAFEKVV 110
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_ANAMF (50S ribosomal protein L20 OS=Anaplasma marginale (strain Florida) GN=rplT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.900e-24 Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 1 Query: 73 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALV 372 R K++ LAKG+RGR+KNC R A +R+EKAL Y+YRDRRN+KRD R LWI RINA RQ G+ Y M G+ I+LNRK+L+E+++++ F+ +V Sbjct: 11 RARHKKVVALAKGYRGRSKNCYRAALQRLEKALVYAYRDRRNRKRDFRRLWIVRINAAARQWGIKYSQLMKGMALCGIELNRKMLAEMAVNDKAAFEKVV 110
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_AGRT5 (50S ribosomal protein L20 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rplT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.900e-24 Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 73 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDISRNA 390 R + K AKGF GR KN IR A+ V+++ QY+YRDR+ KR+ R+LWIQRINA R+ G+ YG F+ GL K I+++RKVLS++++HEP F ALV+ ++ A Sbjct: 11 RAKHTKTLKAAKGFYGRRKNTIRAAKAAVDRSKQYAYRDRKVNKRNFRALWIQRINAAVRESGLTYGRFIDGLNKAGIEVDRKVLSDMAIHEPAAFGALVEAAKKA 116
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_XANP2 (50S ribosomal protein L20 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplT PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.400e-24 Identity = 55/104 (52.88%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 85 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTR--QHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDISRNA 390 K++F+ AKGF GR KN IR A+ VE+++QY+YRDR+ KKR+ R+LWIQRINAG R + Y F+ GL K I+++RKVLS++++HEP FKALV+ ++ A Sbjct: 15 KKVFEAAKGFYGRRKNTIRAAKSAVERSMQYAYRDRKVKKRNFRALWIQRINAGVRALDLDLTYSRFIDGLGKAGIEVDRKVLSDIAIHEPDAFKALVEKAKAA 118
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_RHOFD (50S ribosomal protein L20 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rplT PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.400e-24 Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 73 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 R K++ LAKGFRGR N R+A+E V KA QY+YRDRR KKR R LWI RINA RQ G+ Y F +GL K NI+++RKVLS++++H+ F ++VD Sbjct: 11 RARHKKVLALAKGFRGRRGNVYRVAKEAVMKAGQYAYRDRRTKKRVFRQLWIARINAAARQCGMTYSQFANGLKKANIEIDRKVLSDIAVHDMAAFASIVD 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_FLAPJ (50S ribosomal protein L20 OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rplT PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.400e-24 Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 70 ERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVD 375 +R +K+I K AKGF GR KN +A+ VEKA+ Y+YRDR+ KR+ R+LWIQRINAG R G++Y FM + K NI+LNRKVL++L+M+ P FK +++ Sbjct: 10 KRARRKKIMKQAKGFFGRRKNVWTVAKNAVEKAMCYAYRDRKVNKRNFRALWIQRINAGARLEGMSYSQFMGKVKKHNIELNRKVLADLAMNHPVAFKTILN 111
BLAST of EY756426 vs. ExPASy Swiss-Prot
Match: RL20_DESOH (50S ribosomal protein L20 OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rplT PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.400e-24 Identity = 54/112 (48.21%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 49 LRIKEK-RERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKDNIQLNRKVLSELSMHEPYRFKALVDIS 381 +RIK + R +K+I KLAKGFRG + A+ V+KAL Y+YRDR+ +KRD R LWI RINA R H ++Y FMHGL K ++L+RKVL+EL++ +P F +V ++ Sbjct: 1 MRIKRGFKARHRRKKILKLAKGFRGGHSKLFKTAKNTVDKALGYAYRDRKQRKRDFRRLWIARINAAVRMHSLSYSRFMHGLKKAGVELDRKVLAELAISDPSGFSKVVAVA 112 The following BLAST results are available for this feature:
BLAST of EY756426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756426 ID=EY756426; Name=EY756426; organism=Citrus sinensis; type=EST; length=952bpback to top |