EY756422

Overview
NameEY756422
Unique NameEY756422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_HAEIN (Transketolase OS=Haemophilus influenzae GN=tktA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GK VRVVS  S   FD+Q  AY+ESVLPAAV+ RV+IEAG    W K VG  G+ IG++ FG SAPA +++K FG T E V+  AKE+
Sbjct:  557 IATGSEVELAVQAAEALSAEGKKVRVVSMPSTNRFDKQDAAYRESVLPAAVTKRVAIEAGIADFWYKYVGFNGRVIGMNSFGESAPADQLFKLFGFTVENVVAKAKEI 664          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STRP8 (Transketolase OS=Streptococcus pyogenes serotype M18 GN=tkt PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.569e-19
Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGIT 301
            + TGS               G  VRVVS  S  +FDEQS  YKES+LPAAV+ R++IEAGS+FGW K VG  GK + ID +GASAP  +I++E+G T
Sbjct:  622 IATGSEVKLAMDTQEALEAEGIHVRVVSMPSQNIFDEQSAEYKESILPAAVTKRLAIEAGSSFGWAKYVGLAGKTLTIDTWGASAPGNRIFEEYGFT 718          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STRP6 (Transketolase OS=Streptococcus pyogenes serotype M6 GN=tkt PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.569e-19
Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGIT 301
            + TGS               G  VRVVS  S  +FDEQS  YKES+LPAAV+ R++IEAGS+FGW K VG  GK + ID +GASAP  +I++E+G T
Sbjct:  622 IATGSEVKLAMDTQEALEAEGIHVRVVSMPSQNIFDEQSAEYKESILPAAVTKRLAIEAGSSFGWAKYVGLAGKTLTIDTWGASAPGNRIFEEYGFT 718          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_BACHD (Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.382e-19
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 2
Query:   65 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 328
            K G    VVS  SW+ F+ QS  YKE VLP+ V+AR++IE GS+ GW K VG++G  + IDRFGASAP  +I +EFG T + V+  AK
Sbjct:  573 KEGIHAAVVSMPSWDRFEAQSAEYKEEVLPSDVTARLAIEMGSSLGWAKYVGNQGDVVAIDRFGASAPGERIMEEFGFTVQHVVARAK 660          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STAAW (Transketolase OS=Staphylococcus aureus (strain MW2) GN=tkt PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.723e-19
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 2
Query:   65 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 316
            K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STAAS (Transketolase OS=Staphylococcus aureus (strain MSSA476) GN=tkt PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.723e-19
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 2
Query:   65 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 316
            K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STAAR (Transketolase OS=Staphylococcus aureus (strain MRSA252) GN=tkt PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.723e-19
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 2
Query:   65 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 316
            K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STAAN (Transketolase OS=Staphylococcus aureus (strain N315) GN=tkt PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.723e-19
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 2
Query:   65 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 316
            K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STAAM (Transketolase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tkt PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.723e-19
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 2
Query:   65 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 316
            K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STAAC (Transketolase OS=Staphylococcus aureus (strain COL) GN=tkt PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.723e-19
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 2
Query:   65 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 316
            K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
The following BLAST results are available for this feature:
BLAST of EY756422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
TKT_HAEIN1.967e-1948.15Transketolase OS=Haemophilus influenzae GN=tktA PE... [more]
TKT_STRP82.569e-1950.52Transketolase OS=Streptococcus pyogenes serotype M... [more]
TKT_STRP62.569e-1950.52Transketolase OS=Streptococcus pyogenes serotype M... [more]
TKT_BACHD4.382e-1952.27Transketolase OS=Bacillus halodurans GN=tkt PE=3 S... [more]
TKT_STAAW5.723e-1951.19Transketolase OS=Staphylococcus aureus (strain MW2... [more]
TKT_STAAS5.723e-1951.19Transketolase OS=Staphylococcus aureus (strain MSS... [more]
TKT_STAAR5.723e-1951.19Transketolase OS=Staphylococcus aureus (strain MRS... [more]
TKT_STAAN5.723e-1951.19Transketolase OS=Staphylococcus aureus (strain N31... [more]
TKT_STAAM5.723e-1951.19Transketolase OS=Staphylococcus aureus (strain Mu5... [more]
TKT_STAAC5.723e-1951.19Transketolase OS=Staphylococcus aureus (strain COL... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756422 ID=EY756422; Name=EY756422; organism=Citrus sinensis; type=EST; length=655bp
CCACGCGTCCGTTGGAACTGGTTCTGAATTGGAAATTGCCGCCAAAGCAG
CTGAGGAACTTAGAAAGGGAGGAAAGGCTGTAAGAGTTGTCTCCTTTGTT
TCTTGGGAGCTTTTTGATGAGCAATCAGATGCCTACAAGGAAAGTGTGCT
TCCGGCTGCTGTCTCAGCTAGAGTTAGCATTGAAGCTGGATCTACATTTG
GGTGGGAGAAGATTGTTGGAAGCAAAGGAAAGGCCATCGGCATTGACCGA
TTCGGCGCTAGTGCACCAGCAGGCAAAATATACAAGGAGTTTGGTATCAC
CGCGGAGGCTGTTATCACTGCAGCCAAAGAAGTCTGCTAAGCTGGGGTAG
TCAAAAACTTCTTATTATTCCATATGCATTTGGGAATTGGTGATTACAGT
GAAGAGACCATTCCCAAGAGAGTTGCTTCATTATGGTCTCTCTTGTGTTA
ATAAAAGCAAGATTATTTTTCTTCCTTTTGCTTATTATTCCACTGCAGAG
CATCGTATATTGAAAATACAGAGACGGATACAGAGTATGGCTTGTTCATG
TTCATGAATTTGTATCACACTCTTGGACCTATCTCGAGATTTGGAATGTC
TCCTGATGATTGTGATGCAAATTTGCTCGTCCATCATCAAAAAAAAAAAA
AAAAA
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