EY756422

Overview
NameEY756422
Unique NameEY756422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT1_VIBF1 (Transketolase 1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tkt1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.475e-19
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GKAVRVVS  S + FD+Q + Y+E+V P+AV+ R++IEAG    W K VG  GK IG+  FG SAPA +++K FG T E V+  AKE+
Sbjct:  555 IATGSEVELAVEAAAQLTAEGKAVRVVSMPSTDAFDKQDEGYREAVFPSAVTKRIAIEAGIADFWYKYVGFGGKIIGMTTFGESAPADELFKMFGFTTENVVNTAKEL 662          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT2_VIBVY (Transketolase 2 OS=Vibrio vulnificus (strain YJ016) GN=tkt2 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.665e-18
Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GK VRVVS  + + FD+Q  AY+ESVLP+ V+AR++IEAG T  W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  554 IATGSEVELAVKAAEQLTAEGKKVRVVSMPATDAFDKQDAAYRESVLPSDVTARIAIEAGITDFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 661          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT1_VIBVY (Transketolase 1 OS=Vibrio vulnificus (strain YJ016) GN=tkt1 PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GK VRVVS  + + FD+Q  AY+ESVLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  555 IATGSEVELAVKAAEQLTAEGKKVRVVSMPATDAFDKQDAAYRESVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 662          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT1_VIBPA (Transketolase 1 OS=Vibrio parahaemolyticus GN=tkt1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GK VRVVS  S + FD+Q  AY+E+VLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  555 IATGSEVELAVKAAEQLTAEGKKVRVVSMPSTDAFDKQDAAYREAVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 662          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STAES (Transketolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tkt PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-18
Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 2
Query:   71 GKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            GK VRV+S  +W  F++QS  YKES+LP+ V+ R++IE  S  GW K VG +GK IGI+ FGASAP   + +++G T E ++   + +
Sbjct:  575 GKGVRVISMPNWYAFEQQSSEYKESILPSDVTKRIAIEMASPLGWHKYVGIEGKVIGINSFGASAPGDLVVEKYGFTKENILKQVRSL 662          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STAEQ (Transketolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=tkt PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-18
Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 2
Query:   71 GKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            GK VRV+S  +W  F++QS  YKES+LP+ V+ R++IE  S  GW K VG +GK IGI+ FGASAP   + +++G T E ++   + +
Sbjct:  575 GKGVRVISMPNWYAFEQQSSEYKESILPSDVTKRIAIEMASPLGWHKYVGIEGKVIGINSFGASAPGDLVVEKYGFTKENILKQVRSL 662          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT2_PASMU (Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.079e-17
Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               G  VRVVS  S  +FD+Q  AY+ESVLP+ ++ RV+IEAG    W K VG +G+ +G++ FG SAPA +++K FG T E V+  AKE+
Sbjct:  560 IATGSEVELAMKAADVLDAEGVKVRVVSMPSTNVFDKQDAAYRESVLPSHITKRVAIEAGIADFWYKYVGFEGRVVGMNSFGESAPADQLFKLFGFTVENVVAKAKEI 667          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_PHYPO (Transketolase OS=Physarum polycephalum GN=tkt PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17
Identity = 48/85 (56.47%), Postives = 55/85 (64.71%), Query Frame = 2
Query:   71 GKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAA 325
            G  VRVVS  S   FD+Q   YKE VLP++   RV IEAG T  W K VG +GK IGIDRFG SAP   + K  GITA+AV+ AA
Sbjct:  574 GDGVRVVSMPSTYRFDQQPAEYKEEVLPSSCKKRVVIEAGVTPLWHKYVGLEGKIIGIDRFGTSAPGATVLKTLGITADAVVAAA 658          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT2_VIBVU (Transketolase 2 OS=Vibrio vulnificus GN=tkt2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17
Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GK VRVVS  + + FD+Q  AY+E+VLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  554 IATGSEVELAVKAAEQLTAEGKKVRVVSMPATDTFDKQDAAYREAVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 661          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT1_VIBVU (Transketolase 1 OS=Vibrio vulnificus GN=tkt1 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17
Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GK VRVVS  + + FD+Q  AY+E+VLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  555 IATGSEVELAVKAAEQLTAEGKKVRVVSMPATDTFDKQDAAYREAVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 662          
The following BLAST results are available for this feature:
BLAST of EY756422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
TKT1_VIBF17.475e-1945.37Transketolase 1 OS=Vibrio fischeri (strain ATCC 70... [more]
TKT2_VIBVY1.665e-1845.37Transketolase 2 OS=Vibrio vulnificus (strain YJ016... [more]
TKT1_VIBVY6.328e-1844.44Transketolase 1 OS=Vibrio vulnificus (strain YJ016... [more]
TKT1_VIBPA6.328e-1844.44Transketolase 1 OS=Vibrio parahaemolyticus GN=tkt1... [more]
TKT_STAES8.264e-1845.45Transketolase OS=Staphylococcus epidermidis (strai... [more]
TKT_STAEQ8.264e-1845.45Transketolase OS=Staphylococcus epidermidis (strai... [more]
TKT2_PASMU1.079e-1743.52Transketolase 2 OS=Pasteurella multocida GN=tktB P... [more]
TKT_PHYPO1.410e-1756.47Transketolase OS=Physarum polycephalum GN=tkt PE=2... [more]
TKT2_VIBVU1.410e-1743.52Transketolase 2 OS=Vibrio vulnificus GN=tkt2 PE=3 ... [more]
TKT1_VIBVU1.410e-1743.52Transketolase 1 OS=Vibrio vulnificus GN=tkt1 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756422 ID=EY756422; Name=EY756422; organism=Citrus sinensis; type=EST; length=655bp
CCACGCGTCCGTTGGAACTGGTTCTGAATTGGAAATTGCCGCCAAAGCAG
CTGAGGAACTTAGAAAGGGAGGAAAGGCTGTAAGAGTTGTCTCCTTTGTT
TCTTGGGAGCTTTTTGATGAGCAATCAGATGCCTACAAGGAAAGTGTGCT
TCCGGCTGCTGTCTCAGCTAGAGTTAGCATTGAAGCTGGATCTACATTTG
GGTGGGAGAAGATTGTTGGAAGCAAAGGAAAGGCCATCGGCATTGACCGA
TTCGGCGCTAGTGCACCAGCAGGCAAAATATACAAGGAGTTTGGTATCAC
CGCGGAGGCTGTTATCACTGCAGCCAAAGAAGTCTGCTAAGCTGGGGTAG
TCAAAAACTTCTTATTATTCCATATGCATTTGGGAATTGGTGATTACAGT
GAAGAGACCATTCCCAAGAGAGTTGCTTCATTATGGTCTCTCTTGTGTTA
ATAAAAGCAAGATTATTTTTCTTCCTTTTGCTTATTATTCCACTGCAGAG
CATCGTATATTGAAAATACAGAGACGGATACAGAGTATGGCTTGTTCATG
TTCATGAATTTGTATCACACTCTTGGACCTATCTCGAGATTTGGAATGTC
TCCTGATGATTGTGATGCAAATTTGCTCGTCCATCATCAAAAAAAAAAAA
AAAAA
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