EY756422

Overview
NameEY756422
Unique NameEY756422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_STRPN (Probable transketolase OS=Streptococcus pneumoniae GN=tkt PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               G+ +RVVS  S ++FD+Q  AYKE +LP AV  RV++E G++  W K VG  G  +GID FGASAPA K+  E+G T E ++   + +
Sbjct:  550 IATGSEVNLAVSAAKELASQGEKIRVVSMPSTDVFDKQDAAYKEEILPNAVRRRVAVEMGASQNWYKYVGLDGAVLGIDTFGASAPAPKVLAEYGFTVENLVKVVRNL 657          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_DICDI (Transketolase OS=Dictyostelium discoideum GN=tkt-1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 2
Query:   71 GKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKE 331
            G  +RVVS    ELFD QS+ YK+SVLP+    R+++EAG T  W K VG  GK IGIDRFG SAP   + K+ G+T+E ++  +K+
Sbjct:  575 GDDIRVVSMPCTELFDRQSNEYKQSVLPSGCRNRIAMEAGVTSFWYKYVGLDGKVIGIDRFGMSAPGNAVMKQLGMTSENLVNISKQ 661          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT2_VIBPA (Transketolase 2 OS=Vibrio parahaemolyticus GN=tkt2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17
Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GK VRVVS  S + FD+Q   Y+E+VLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  554 IATGSEVELAVKAAEQLTAEGKKVRVVSMPSTDAFDKQDADYREAVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 661          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT2_ECOLI (Transketolase 2 OS=Escherichia coli (strain K12) GN=tktB PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               G+ VRVVS  S ++FD Q + Y+ESVLP+ V+ARV++EAG    W K VG KG  +G+  +G SAPA K++  FG TAE ++  A +V
Sbjct:  554 IATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVAARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHKV 661          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT1_ECOLI (Transketolase 1 OS=Escherichia coli (strain K12) GN=tktA PE=1 SV=5)

HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17
Identity = 47/108 (43.52%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               G   RVVS  S + FD+Q  AY+ESVLP AV+ARV++EAG    W K VG  G  +G+  FG SAPA  +++EFG T + V+  AKE+
Sbjct:  555 IATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKEL 662          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT1_PASMU (Transketolase 1 OS=Pasteurella multocida GN=tktA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.137e-17
Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               G  VRVVS  S  +FD+Q  AY+ESVLP+ ++ RV+IEAG    W K VG +G+ +G++ FG SAPA +++K FG T E ++  AK +
Sbjct:  560 IATGSEVELAMKAADVLDAEGVKVRVVSMPSTNVFDKQDAAYRESVLPSHITKRVAIEAGIADFWYKYVGFEGRVVGMNSFGESAPADQLFKLFGFTVENIVEKAKAI 667          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_BACSU (Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.472e-16
Identity = 42/83 (50.60%), Postives = 53/83 (63.86%), Query Frame = 2
Query:   80 VRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 328
            V VVS  S + F++QSD YK  VLPA V  R++IE GS+FGW K  G +G  +GIDRFGASAP   I  E+G +   V+   K
Sbjct:  580 VSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGASAPGETIINEYGFSVPNVVNRVK 662          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKTP_RALEH (Transketolase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbTP PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.319e-15
Identity = 46/106 (43.40%), Postives = 61/106 (57.55%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 328
            + TGS               G A RVVS    ELF  Q  AY++SVLP  +  R+S+EAG+T+ W  +VG +G A+GID FG SAPA  +Y+ FG+T   V  AA+
Sbjct:  560 IATGSEVEIAARAALDLADAGIAARVVSMPCVELFYAQDAAYRDSVLPPGLP-RISVEAGATWYWRGVVGEQGLALGIDSFGESAPAEALYQHFGLTPAHVAAAAR 664          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_MYCLE (Transketolase OS=Mycobacterium leprae GN=tkt PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 2
Query:   80 VRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            VRVVS    E F+ Q   Y++SVLP +VSARV++EAG    W K+VG  GK + I+ +G SA    +++E+G T EAV+ AA++V
Sbjct:  612 VRVVSMPCVEWFESQPYEYRDSVLPPSVSARVAVEAGVAQCWHKLVGDTGKIVSIEHYGESADYQTLFREYGFTPEAVVAAAEQV 696          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKTC_RALEH (Transketolase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbTC PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15
Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 328
            + TGS               G A RVVS    ELF  Q  AY+++VLP  +  RVS+EAG T+ W  +VG +G A+GID FG SAPA  +Y+ FG+T   V  AA+
Sbjct:  560 IATGSEVEIAMRAALDLADAGIAARVVSMPCVELFYAQDVAYRDTVLPPGLP-RVSVEAGGTWFWRGVVGEQGLALGIDTFGESAPAEALYQHFGLTPAHVAAAAR 664          
The following BLAST results are available for this feature:
BLAST of EY756422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
TKT_STRPN3.140e-1740.74Probable transketolase OS=Streptococcus pneumoniae... [more]
TKT_DICDI3.140e-1749.43Transketolase OS=Dictyostelium discoideum GN=tkt-1... [more]
TKT2_VIBPA3.140e-1743.52Transketolase 2 OS=Vibrio parahaemolyticus GN=tkt2... [more]
TKT2_ECOLI5.357e-1742.59Transketolase 2 OS=Escherichia coli (strain K12) G... [more]
TKT1_ECOLI5.357e-1743.52Transketolase 1 OS=Escherichia coli (strain K12) G... [more]
TKT1_PASMU9.137e-1741.67Transketolase 1 OS=Pasteurella multocida GN=tktA P... [more]
TKT_BACSU3.472e-1650.60Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=... [more]
TKTP_RALEH1.319e-1543.40Transketolase, plasmid OS=Ralstonia eutropha (stra... [more]
TKT_MYCLE3.839e-1547.06Transketolase OS=Mycobacterium leprae GN=tkt PE=3 ... [more]
TKTC_RALEH3.839e-1543.40Transketolase, chromosomal OS=Ralstonia eutropha (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756422 ID=EY756422; Name=EY756422; organism=Citrus sinensis; type=EST; length=655bp
CCACGCGTCCGTTGGAACTGGTTCTGAATTGGAAATTGCCGCCAAAGCAG
CTGAGGAACTTAGAAAGGGAGGAAAGGCTGTAAGAGTTGTCTCCTTTGTT
TCTTGGGAGCTTTTTGATGAGCAATCAGATGCCTACAAGGAAAGTGTGCT
TCCGGCTGCTGTCTCAGCTAGAGTTAGCATTGAAGCTGGATCTACATTTG
GGTGGGAGAAGATTGTTGGAAGCAAAGGAAAGGCCATCGGCATTGACCGA
TTCGGCGCTAGTGCACCAGCAGGCAAAATATACAAGGAGTTTGGTATCAC
CGCGGAGGCTGTTATCACTGCAGCCAAAGAAGTCTGCTAAGCTGGGGTAG
TCAAAAACTTCTTATTATTCCATATGCATTTGGGAATTGGTGATTACAGT
GAAGAGACCATTCCCAAGAGAGTTGCTTCATTATGGTCTCTCTTGTGTTA
ATAAAAGCAAGATTATTTTTCTTCCTTTTGCTTATTATTCCACTGCAGAG
CATCGTATATTGAAAATACAGAGACGGATACAGAGTATGGCTTGTTCATG
TTCATGAATTTGTATCACACTCTTGGACCTATCTCGAGATTTGGAATGTC
TCCTGATGATTGTGATGCAAATTTGCTCGTCCATCATCAAAAAAAAAAAA
AAAAA
back to top