EY756422

Overview
NameEY756422
Unique NameEY756422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_AQUAE (Transketolase OS=Aquifex aeolicus GN=tkt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14
Identity = 40/101 (39.60%), Postives = 54/101 (53.47%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAV 313
            + TGS             + G   RVV+    ELF+EQ + YK  VLP  V+ RV++EAG   GW K VGS G  I ++ FG SAP   +++ +G T E V
Sbjct:  579 IATGSEVQVALGAKEILEQKGIKTRVVNMACCELFEEQPEEYKREVLPPEVTKRVAVEAGRDTGWYKYVGSDGLVISLNEFGKSAPGSVLFEYYGFTPENV 679          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_SINMW (Transketolase OS=Sinorhizobium medicae (strain WSM419) GN=cbbT PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 2
Query:   71 GKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            G A  VVS   WE F+ Q  AY+  VL  A   R++IEA    GW++ +G  G  +G+  FGASAPAG +Y+ FGITA+ V+  A E+
Sbjct:  580 GIAAAVVSMPCWEKFEVQDLAYRRKVLGDA--PRIAIEAAGRLGWDRWMGPDGAFVGMTGFGASAPAGDLYRHFGITADHVVAEALEL 665          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_MYCTU (Transketolase OS=Mycobacterium tuberculosis GN=tkt PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.045e-12
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 2
Query:   83 RVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 328
            RVVS    E F+ Q   Y+++VLP  VSARV++EAG    W ++VG  G+ + I+ +G SA    +++E+G TAEAV  AA+
Sbjct:  614 RVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCWHQLVGDTGEIVSIEHYGESADHKTLFREYGFTAEAVAAAAE 695          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_MYCBO (Transketolase OS=Mycobacterium bovis GN=tkt PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.045e-12
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 2
Query:   83 RVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 328
            RVVS    E F+ Q   Y+++VLP  VSARV++EAG    W ++VG  G+ + I+ +G SA    +++E+G TAEAV  AA+
Sbjct:  614 RVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCWHQLVGDTGEIVSIEHYGESADHKTLFREYGFTAEAVAAAAE 695          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_BUCAP (Transketolase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=tkt PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.045e-12
Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 2
Query:   71 GKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 328
            G +VRVVS  S  +FD Q+  YKES+LP+ ++ R+ IEA     W K  GS+G  IG++ FG SA    ++K+FG T E ++  +K
Sbjct:  575 GYSVRVVSMPSNNVFDRQNIDYKESILPSYITKRIVIEASIKDFWYKYAGSEGLIIGMETFGESASEEVLFKKFGFTVENIVNKSK 660          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_RHIME (Transketolase OS=Rhizobium meliloti GN=cbbT PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.365e-12
Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 2
Query:   77 AVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            A  VVS   WE F+ Q  AY   VL  A   R++IEA    GW++ +G     +G+  FGASAPAG +Y+ FGITA+ V+  A E+
Sbjct:  582 AAAVVSMPCWEKFEAQDAAYHRQVLGDA--PRIAIEAAGRLGWDRWMGPDSAFVGMTGFGASAPAGDLYRHFGITADHVVAEALEL 665          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_BUCAI (Transketolase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=tkt PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12
Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAV 313
            + TGS               G +VRVVS     +FD Q  +YKE VLP  V+ RV++EA     W K VG  G  IG+  FG SAPA  ++K+FG T + +
Sbjct:  555 ISTGSELNVTLIAAKKLASLGYSVRVVSMPCTSVFDRQDASYKEFVLPTYVAKRVAVEASIEDFWYKYVGINGVIIGMKTFGESAPAEDLFKKFGFTVQNI 655          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_BUCBP (Transketolase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=tkt PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-12
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAV 313
            V TGS             K G  VRVVS  S  +FD+Q + YKE + P  +  RV+IEAG +  W K VG  G  IGID FG S  + +++ +FG  ++ +
Sbjct:  555 VATGSEVKIALDVSNILFKKGILVRVVSMPSTNVFDQQDNDYKEFIFPRCLVHRVAIEAGISDFWYKYVGLTGCIIGIDTFGESGSSDQLFSKFGFNSDII 655          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_XANFL (Transketolase OS=Xanthobacter flavus GN=cbbT PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.972e-11
Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 2
Query:   71 GKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAA 325
            G   RVVS  S+ELF E+  A +  V+  A  A+V++EA    GW+ IVGS    +G+  FGASAPA ++Y  FGITA+ V   A
Sbjct:  578 GVPTRVVSISSFELFLERPAAERAKVIGDA-PAKVAVEAAIRMGWDAIVGSNAAFVGMTSFGASAPAKELYAHFGITAQQVAARA 661          
The following BLAST results are available for this feature:
BLAST of EY756422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
TKT_AQUAE7.240e-1439.60Transketolase OS=Aquifex aeolicus GN=tkt PE=3 SV=1[more]
TKT_SINMW1.235e-1345.45Transketolase OS=Sinorhizobium medicae (strain WSM... [more]
TKT_MYCTU1.045e-1243.90Transketolase OS=Mycobacterium tuberculosis GN=tkt... [more]
TKT_MYCBO1.045e-1243.90Transketolase OS=Mycobacterium bovis GN=tkt PE=3 S... [more]
TKT_BUCAP1.045e-1243.02Transketolase OS=Buchnera aphidicola subsp. Schiza... [more]
TKT_RHIME1.365e-1244.19Transketolase OS=Rhizobium meliloti GN=cbbT PE=3 S... [more]
TKT_BUCAI3.042e-1239.60Transketolase OS=Buchnera aphidicola subsp. Acyrth... [more]
TKT_BUCBP8.850e-1238.61Transketolase OS=Buchnera aphidicola subsp. Baizon... [more]
TKT_XANFL1.972e-1145.88Transketolase OS=Xanthobacter flavus GN=cbbT PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756422 ID=EY756422; Name=EY756422; organism=Citrus sinensis; type=EST; length=655bp
CCACGCGTCCGTTGGAACTGGTTCTGAATTGGAAATTGCCGCCAAAGCAG
CTGAGGAACTTAGAAAGGGAGGAAAGGCTGTAAGAGTTGTCTCCTTTGTT
TCTTGGGAGCTTTTTGATGAGCAATCAGATGCCTACAAGGAAAGTGTGCT
TCCGGCTGCTGTCTCAGCTAGAGTTAGCATTGAAGCTGGATCTACATTTG
GGTGGGAGAAGATTGTTGGAAGCAAAGGAAAGGCCATCGGCATTGACCGA
TTCGGCGCTAGTGCACCAGCAGGCAAAATATACAAGGAGTTTGGTATCAC
CGCGGAGGCTGTTATCACTGCAGCCAAAGAAGTCTGCTAAGCTGGGGTAG
TCAAAAACTTCTTATTATTCCATATGCATTTGGGAATTGGTGATTACAGT
GAAGAGACCATTCCCAAGAGAGTTGCTTCATTATGGTCTCTCTTGTGTTA
ATAAAAGCAAGATTATTTTTCTTCCTTTTGCTTATTATTCCACTGCAGAG
CATCGTATATTGAAAATACAGAGACGGATACAGAGTATGGCTTGTTCATG
TTCATGAATTTGTATCACACTCTTGGACCTATCTCGAGATTTGGAATGTC
TCCTGATGATTGTGATGCAAATTTGCTCGTCCATCATCAAAAAAAAAAAA
AAAAA
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