EY756385

Overview
NameEY756385
Unique NameEY756385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756385_ssr53 microsatellite EY756385_ssr53:53..64. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.104e-33
Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = 1
Query:   97 MVNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQS 561
            M+ D CVAD K    P    G PC     VTA+DF F GL  AGNTT+ + + VT A V + P +N +G+S+AR+D A  G+ P HTHP A+EI+ V  G +  GF+ ++AN ++ +T+ KG++ +FP+GL+HFQ NSG   AL   +FNS  PG QS
Sbjct:   27 MLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFV-TTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQS 183          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.349e-33
Identity = 72/155 (46.45%), Postives = 99/155 (63.87%), Query Frame = 1
Query:   97 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQS 561
            ++ D CVADL  +    G+ C   A VT DDF F GL  AGNT +   + VT A V + P +N LG+S++R+D A GG+ P HTHP A+E++ V+ G +  GFI ++AN +Y KT+  GD+ +FP+GLLHFQ N+G   A    +FNS  PG QS
Sbjct:   30 LLQDICVADLTSAVKVNGFAC--KAAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFI-TTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQS 181          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.221e-32
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 1
Query:   94 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS-ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 555
            + + DFCVAD        G+ C  PA +T +DF FSGL +AGNT++   +AVT   VAQ   +N LG+SLAR+D A  G+ P H HP A+EIL ++ G +  GF++S+  N ++ K L KGD+ +FPQGL+HFQ N G    +   + +S NPG+
Sbjct:   25 SQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGV 179          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.595e-32
Identity = 70/154 (45.45%), Postives = 96/154 (62.34%), Query Frame = 1
Query:   97 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGF-ISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 555
            ++ DFCV D        G+PC     V A DF FSGL +AGNTT+   + VT   VAQ P +N +G+SL R+D A  G+ P HTHP A+EI  V+ G +  GF IS+  N ++ K L KGD+ +FPQGL+HFQ N+G + A+   + +S NPG+
Sbjct:   33 LLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGV 186          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.640e-32
Identity = 71/153 (46.41%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  100 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS-ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 555
            + D CVAD   +    G  C     V A+DF FSGL +AGNTT+   +AVT   VAQ P +N LG+SLAR+D A  G+ P HTHP A+EIL V+ G +  GF++S+  N ++ K + KGD+ +FP+GL+HFQ N G   A+  V+ +S NPG+
Sbjct:   34 LQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGV 186          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.914e-32
Identity = 70/158 (44.30%), Postives = 99/158 (62.66%), Query Frame = 1
Query:   97 MVNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQS 561
            M+ D CVAD K    P    G+PC     VTA+DF F GL  AGNT + + + VT A V   P +N +G+S+AR+D A  G+ P HTHP A+EI+ VV G +  GF+ ++AN ++ +T+ KG++ +FP+GL+HFQ N+G   A    + NS  PG QS
Sbjct:   27 MLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFV-TTANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQS 183          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.007e-31
Identity = 73/155 (47.10%), Postives = 97/155 (62.58%), Query Frame = 1
Query:   97 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQS 561
            M+ D CVADL       G+PC   A VTADDF F+GL   GNT +   + VT A V  FP VN LG+S+AR+D A GG  P HTHP A+EI+ V+ G +  GFI ++AN ++ KT+  G++ +FP+GL+HFQ N G   A    +FNS   G Q+
Sbjct:   29 MLQDVCVADLASPVKLNGFPC--KANVTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFI-TTANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQA 180          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.928e-31
Identity = 70/159 (44.03%), Postives = 97/159 (61.01%), Query Frame = 1
Query:   94 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVF-SGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 555
            + + DFCVAD   +    G+ C  P  VTA+DF     LGV GNT +   +AVTP  V + P +N LG+S AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N  + K L  GD+ +FPQGL+HFQ+N+GA  A+   + +S NPG+
Sbjct:   31 SQLQDFCVADKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGV 189          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.493e-30
Identity = 71/154 (46.10%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  100 VNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPG 552
            + DFCVA  + +     G  C  P  VTA+DF +SGL +A NTT+ + + VT   V + P +N LG+SLARLD A+GG  P H HP A+EIL+V  G +  GF+SS+   N ++ K LK+GD+ +FP GL+HFQ+N     A+ F  F S NPG
Sbjct:   31 LQDFCVAASETNRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPG 184          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 70/155 (45.16%), Postives = 95/155 (61.29%), Query Frame = 1
Query:   97 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQS 561
            M+ D CVADL       G+PC   A VT+ DF   GL   G T +   A VT A V   P +N LG+SL+R+D A GG+ P HTHP A+E++ V+ G +  GF+ ++AN +  ++LKKGD+  FP+GL+HFQ N+G   A    +FNS  PG QS
Sbjct:   27 MLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFL-TTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQS 180          
The following BLAST results are available for this feature:
BLAST of EY756385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL32_ORYSJ1.104e-3346.20Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL52_ORYSJ9.349e-3346.45Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL21_ORYSJ1.221e-3244.52Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL22_ORYSJ1.595e-3245.45Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL23_ORYSJ4.640e-3246.41Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL13_ORYSJ7.914e-3244.30Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL11_ORYSJ3.007e-3147.10Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL41_ORYSJ3.928e-3144.03Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL16_ARATH1.493e-3046.10Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL21_ARATH2.546e-3045.16Germin-like protein subfamily 2 member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-A06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756385 ID=EY756385; Name=EY756385; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGAAAATAACTACACTAAATATTAGTCAAAATGCTTCACAT
TCTCTTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTATGG
TTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGC
TATCCTTGCGTGCCCCCTGCTATGGTTACCGCTGACGACTTCGTATTTTC
GGGCCTCGGCGTGGCCGGAAACACCACGAGTATTATCAACGCGGCAGTGA
CACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGCCTCGGACTCTCC
TTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATGCACACTCA
TCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGCCG
GGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGAAG
GGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCAAGTAAATTC
CGGCGCGGACGGAGCCCTCGGTTTTGTTAGCTTCAACAGCCCGAATCCTG
GACTCCAATCACCGATTTCGCCTTATTTGCCACAACTTGTCTTCCCAATT
GGTGGAGCAGACCACTTTCCTTGACGATGCTACGGTGAAGAGGCTCAAGG
GTATCCTTGGTGGCACCGGCTAGGCTTATTAGTTACACATTCTTCATTTG
NNNAGTTTGAGTCTNAANNTTCATTTAGTGCTAATGGATTTNNGATGTGG
AATTCACGAGTAGTATTTTCTCTGGTCTCACTTCCCNTATCTTTCTCTGA
ATAATAAATTCTCTCATTAAAAAAAAAAAAAAGGCNGCCCGTCTAAAGAT
TCAAGTTTCGTACCGTGCATGCGAGTCATACTCTCTATAGGCACCTAATT
CATTACTGGCGCCGT
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