EY756362

Overview
NameEY756362
Unique NameEY756362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756362 vs. ExPASy Swiss-Prot
Match: TKT_MYCGE (Transketolase OS=Mycoplasma genitalium GN=tkt PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17
Identity = 57/194 (29.38%), Postives = 96/194 (49.48%), Query Frame = 2
Query:   14 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXXXXXXXXVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGW---EKIVGSKGKAIGIDRFGASAPAGKIYKEFGITREAVI 586
            +G DGPTHQP + L   RA+ N+ + RP D  ET   +   + ++ + ++L L+RQ L  +  T      KG YI+ D     +PD+I+  +GS                  VR++S  +  L  +Q + Y +S+  A  S+ ++IEA S++ W   +K V +    +G   FG S    K+Y++ G   E ++
Sbjct:  452 VGGDGPTHQPYDQLPMLRAIENVCVFRPCDEKETCAGFNYGLLSQDQTTVLVLTRQPLKSIDNTDSLKTLKGGYILLDR---KQPDLIIAASGSEVQLAIEFEKVLTKQNVKVRILSVPNITLLLKQDEKYLKSLFDAN-SSLITIEASSSYEWFCFKKYVKNHAH-LGAFSFGESDDGDKVYQQKGFNLERLM 640          
BLAST of EY756362 vs. ExPASy Swiss-Prot
Match: TKT_MYCPN (Transketolase OS=Mycoplasma pneumoniae GN=tkt PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.344e-14
Identity = 54/186 (29.03%), Postives = 85/186 (45.70%), Query Frame = 2
Query:   14 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXXXXXXXXVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVG--SKGKAIGIDRFGASAPAGKIYKEFG 565
            +G DGPTHQP + L   RA+ N+ + RP D  ETA      + ++ + ++L L+RQ LP L  +      KG YIIS+     +PDVI+  +GS                   RVVS  +  +   Q  +Y + +     S  +++EA ++  W  +     K   +G   FG S     +Y+  G
Sbjct:  452 VGGDGPTHQPYDQLPMLRAIENVQVWRPCDEKETAAGVNYGLLSQDQTNVLILTRQALPSLEQSDSVQTLKGGYIISNR---KQPDVIVAASGSEVQLALQLEQALNEQQLKTRVVSVPNINMLLSQPQSYLQQLFDPN-SVLLTLEASASMEWYALAKYVKKHTHLGAFSFGESNDGQVVYEHKG 633          
The following BLAST results are available for this feature:
BLAST of EY756362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
TKT_MYCGE5.483e-1729.38Transketolase OS=Mycoplasma genitalium GN=tkt PE=3... [more]
TKT_MYCPN4.344e-1429.03Transketolase OS=Mycoplasma pneumoniae GN=tkt PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-G04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756362 ID=EY756362; Name=EY756362; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGGTCTTGGAGAAGATGGACCTACCCATCAGCCAATTGAAC
ACTTGGCAAGTTTCCGTGCCATGCCCAACATTTTGATGCTCCGTCCGGCT
GACGGTAATGAAACTGCTGGTGCATACAAGGTTGCTGTTGCCAACAGGAA
GAGACCGTCCATCCTTGCCCTTTCCCGGCAAAAGCTTCCCCACCTTGCTG
GAACTTCCATTGATGGTGTTGAAAAGGGTGCCTACATAATTTCGGACAAT
TCTTCTGGTAACAAACCTGATGTCATTTTGATTGGAACTGGTTCTGAATT
GGAAATTGCCGCCAAAGCAGCTGAGGAACTTANAAAGGGAGGAAAGGCTG
TAAGAGTTGTCTCCTTTGTTTCTTGGGAGCTTTTTGATGAGCAATCAGAT
GCCTACAAGGAAAGTGTGCTTCCGGCTGCTGTCTCAGCTAGAGTTAGCAT
TGAAGCTGGATCTACATTTGGGTGGGAGAAGATTGTTGGAAGCAAAGGAA
AGGCCATCGGCATTGACCGATTCGGTGCTAGTGCACCAGCAGGCAAAATA
TACAAGGAGTTTGGTATCACCCGCGAGGCTGTTATCACTGCAGCCAAAGA
AGTCTGCTAAGCTTGGTTNAGCAAAAACTTCTTTTATATTCATATGCATT
TGGGGATTGGNTGATTACAGTGAAGAGACCATTCCCAAGAGAGTGGCTTC
ATTATGGGCTCTNCTTGNTTAATAAAGCAANGATNNATTTTCTCCTTTTG
CNNTATATCCACTGCAGAGCATCNAAAATGAAAAAAAGAAGAGGGAGAAA
AAGTAGGGCTTGTTCATGNTCATGATTTGGATCAACTCCTTGGACCATCT
GGAGATTGGAATGGTTCCCTGTAGATTGGAGCAAATTTGTCCCCAAAAAA
AAAAAAAAAAAAAAAGGGCGG
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