EY756358

Overview
NameEY756358
Unique NameEY756358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_ODOSI (Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.416e-31
Identity = 63/98 (64.29%), Postives = 78/98 (79.59%), Query Frame = 3
Query:   93 MATYKVKLITPGGEEE--INCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            MATYKV L++   + +  I+C DD F+LDAAEE G++LPYSCRAGACS+C GKV  G +DQSEQ+FLDDDQ+G GFVLTC AYP SD T+  H+E+EL
Sbjct:    1 MATYKVTLLSEEHDIDATIDCNDDVFLLDAAEEQGIELPYSCRAGACSTCAGKVTEGDIDQSEQTFLDDDQVGAGFVLTCIAYPKSDCTVLVHQEDEL 98          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.416e-31
Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 3
Query:  102 YKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            YK++L+    G +  INCP D +ILDAAEE G+DLPYSCRAGACS+C GK+V G+VDQS+QSFLD++Q+  GF+LTC AYPTSD  I+TH+EE L
Sbjct:    2 YKIQLVNQKEGVDVTINCPGDQYILDAAEEQGVDLPYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSDCVIQTHQEEAL 96          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_SYNP4 (Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.380e-31
Identity = 65/98 (66.33%), Postives = 75/98 (76.53%), Query Frame = 3
Query:   93 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            MA+YKV LI    G  E I  PDD +ILD AEE G+DLPYSCRAGACS+C GK+  G +DQS+QSFLDDDQ+  G+VLTC AYP SD TI TH+EEEL
Sbjct:    1 MASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEEL 98          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_RHOPL (Ferredoxin OS=Rhodymenia palmata PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.380e-31
Identity = 62/93 (66.67%), Postives = 75/93 (80.65%), Query Frame = 3
Query:  102 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            Y V L TPGG EEI   + T++LD+AE+ G+DLPYSCRAGACS+C G V  GTVDQS+QSFLDDDQ+ + FVLTC AYPTSD  I+TH+EE+L
Sbjct:    4 YTVTLSTPGGVEEIEGDETTYVLDSAEDQGIDLPYSCRAGACSTCAGIVELGTVDQSDQSFLDDDQLNDSFVLTCVAYPTSDCQIKTHQEEKL 96          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_PORYE (Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.429e-30
Identity = 63/98 (64.29%), Postives = 77/98 (78.57%), Query Frame = 3
Query:   93 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            MA YK+ L+    G +   NC +DT+ILDAAEE G++LPYSCRAGACS+C GKV  GTVDQ++QSFLDDDQ+  G+VLTC AYP+SD TI TH E+EL
Sbjct:    1 MADYKIHLLCEEEGIDVTFNCAEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQADQSFLDDDQLLAGYVLTCIAYPSSDCTISTHVEQEL 98          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER2_NOSMU (Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 3.184e-30
Identity = 64/99 (64.65%), Postives = 78/99 (78.79%), Query Frame = 3
Query:   93 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 383
            MATYKV+L     G +E I  PDD +ILDAAEEAGLDLP+SCR+G+CSSC G +  GTVDQS+Q+FLDDDQ+  G VLTC AYPTS+  IETH+E+ +A
Sbjct:    1 MATYKVRLFNAAEGLDETIEVPDDEYILDAAEEAGLDLPFSCRSGSCSSCNGILKKGTVDQSDQNFLDDDQIAAGNVLTCVAYPTSNCEIETHREDAIA 99          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_PORPU (Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 7.094e-30
Identity = 62/98 (63.27%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   93 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            MA YK+ L++   G +   +C +DT+ILDAAEEAG++LPYSCRAGACS+C GKV  G+VDQS+QSFLDD+Q+ +G+VLTC AYP SD TI TH E+EL
Sbjct:    1 MADYKIHLLSEDEGIDVTFDCSEDTYILDAAEEAGIELPYSCRAGACSTCAGKVTEGSVDQSDQSFLDDEQLLKGYVLTCIAYPESDCTILTHVEQEL 98          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_PORUM (Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.210e-29
Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 3
Query:   96 ATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            A YK+ L++   G +   +C +DT+ILDAAEE G++LPYSCRAGACS+C GKV  GTVDQS+QSFLDD+QM +G+VLTC AYP SD TI TH E+EL
Sbjct:    1 ADYKIHLVSKEEGIDVTFDCSEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYPESDCTILTHVEQEL 97          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.005e-29
Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 3
Query:   90 AMATYKVKLITPGG-EEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            A   +KVKL+ P G E E   PDDT+IL+AAE AG++LP+SCRAG+CS+C G++ +G VDQSE SFLDD QM EG++LTC +YP +D  I THKEE+L
Sbjct:   57 AAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER4_ARATH (Probable ferredoxin-4, chloroplastic OS=Arabidopsis thaliana GN=FD4 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.635e-26
Identity = 60/112 (53.57%), Postives = 82/112 (73.21%), Query Frame = 3
Query:   54 FGLKANRG--GRVVAMATYKVKLITPGGEE-EINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            FGL ++RG  G+V A  + KVKLI+P GEE EI   +D  IL++AE AGL+LPYSCR+G C +C GK+VSG VDQS  SFL+++Q+ +G++LTC A P  D  + THK+ +L
Sbjct:   36 FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147          
The following BLAST results are available for this feature:
BLAST of EY756358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER_ODOSI6.416e-3164.29Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2[more]
FER2_CYACA6.416e-3164.21Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]
FER_SYNP48.380e-3166.33Ferredoxin OS=Synechococcus sp. (strain PCC 7418) ... [more]
FER_RHOPL8.380e-3166.67Ferredoxin OS=Rhodymenia palmata PE=1 SV=1[more]
FER_PORYE1.429e-3064.29Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1[more]
FER2_NOSMU3.184e-3064.65Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2[more]
FER_PORPU7.094e-3063.27Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2[more]
FER_PORUM1.210e-2963.92Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV... [more]
FER6_MAIZE6.005e-2960.20Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE... [more]
FER4_ARATH1.635e-2653.57Probable ferredoxin-4, chloroplastic OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-F12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756358 ID=EY756358; Name=EY756358; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCAGGCT
ATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGGCTAC
ATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAACTGTC
CTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTT
CCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTTGT
GTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAA
TGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTT
ACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCT
TGATATCTCATTATTATCTTCTCTTTTATGGGGTGGGTTTTGTCTGATTA
TTTTAATGCTTTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTAA
TGTGTTTTTATTTCTTGTTGCAAAGAAGTTGTAATTGCACCGGCCATGAA
TGCGCATCGTACCTCAAAGGGTGAGGTTTCTCATCCCATCCCAACATGGT
ACCGTTCTATAATTANGAAGCAAGCAAGAACATGGGATCTTTCGGTGGAT
TTCATCGGAATTTTCAAACAAGTGGGATTGATTTGTCCNNNCCCACCNAA
GACGCGGGAAAACATTCCCCTTCTCNNNAAGGGGGGGCCGGCTCTGAGGA
TCCAGCTTACTTACGGGGGATGGCAAGCCTAATCTCTTTAAAGGGGCCCT
AAATTAATTCCTGGGCGGGGTTTAAACCGCGGGGATGGGAAAACCTGGGG
TACCCAATTTATGCCCTGGAAAAACCCCCTTTTCCCCTGGGAAA
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