EY732282

Overview
NameEY732282
Unique NameEY732282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: DYRK2_CHICK (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Gallus gallus GN=DYRK2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.551e-18
Identity = 53/141 (37.59%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  287 RYVVQSKLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHRELSIIHTDLKPENVLL 709
            RY V   +G G F  V   +D +   +VALK+ ++ + +   A +EI+IL+ +   D D+   V+ +L++F        H+CM FE L  NL  LIK   ++G  L  V++  + IL  LD LH+   IIH DLKPEN+LL
Sbjct:  146 RYEVLKVIGKGSFGQVVKAYDHKMHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNNMNVIHMLENFTFRS----HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILL 281          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: CLK3_RAT (Dual specificity protein kinase CLK3 OS=Rattus norvegicus GN=Clk3 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17
Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 2
Query:  164 AEDKHGDPSELSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLTWD-TQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHRELSIIHTDLKPENVLLLS 715
            A  +    S+ S  + ED+      + G+   RIGD  +  RY +   LG G F  V    D  +    VALK+ ++   Y EAA  EI +LK+I + D ++K   V + D F   G    H+C+ FE LG N    +K  +++  PL  V+ + Y +   L +LH E  + HTDLKPEN+L ++
Sbjct:  121 ASSRSQQSSKRSSRSVEDD------KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN 293          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: CLK3_MOUSE (Dual specificity protein kinase CLK3 OS=Mus musculus GN=Clk3 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17
Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 2
Query:  164 AEDKHGDPSELSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLTWD-TQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHRELSIIHTDLKPENVLLLS 715
            A  +    S+ S  + ED+      + G+   RIGD  +  RY +   LG G F  V    D  +    VALK+ ++   Y EAA  EI +LK+I + D ++K   V + D F   G    H+C+ FE LG N    +K  +++  PL  V+ + Y +   L +LH E  + HTDLKPEN+L ++
Sbjct:  269 ASSRSQQSSKRSSRSVEDD------KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN 441          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: CLK3_HUMAN (Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17
Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 2
Query:  164 AEDKHGDPSELSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLTWD-TQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHRELSIIHTDLKPENVLLLS 715
            A  +    S+ S  + ED+      + G+   RIGD  +  RY +   LG G F  V    D  +    VALK+ ++   Y EAA  EI +LK+I + D ++K   V + D F   G    H+C+ FE LG N    +K  +++  PL  V+ + Y +   L +LH E  + HTDLKPEN+L ++
Sbjct:  269 ASSRSQQSSKRSSRSVEDD------KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN 441          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17
Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 2
Query:  164 AEDKHGDPSELSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLTWD-TQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHRELSIIHTDLKPENVLLLS 715
            A  +    S+ S  + ED+      + G+   RIGD  +  RY +   LG G F  V    D  +    VALK+ ++   Y EAA  EI +LK+I + D ++K   V + D F   G    H+C+ FE LG N    +K  +++  PL  V+ + Y +   L +LH E  + HTDLKPEN+L ++
Sbjct:  121 ASSRSQQSSKRSSRSVEDD------KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN 293          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: DYR1A_XENTR (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus tropicalis GN=dyrk1a PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  278 KNG-----RYVVQSKLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHR-ELSIIHTDLKPENVLLLSKIDPSRDARK 745
            KNG     RY + S +G G F  V   +D     +VA+K+ K+ + +   A  E+++L+ +   D + K  +V L  HF        H+C+VFE L  NL  L++ T++RGV L+  ++    +   L +L   ELSIIH DLKPEN+LL    +P R A K
Sbjct:  142 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRAEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIK 296          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: CLK2_MOUSE (Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17
Identity = 57/177 (32.20%), Postives = 94/177 (53.11%), Query Frame = 2
Query:  188 SELSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLTWDTQTSHY-VALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHRELSIIHTDLKPENVLLLS 715
            S  S ++S    + +    G+    +GD  +  RY + S LG G    V    D +     VALK+ K+ + Y EAA  EI +L++I + DPD+K   V++ D F + G    H+C+ FE LG +    +K  +Y   P+H V+ + + +   + +LH +  + HTDLKPEN+L ++
Sbjct:  129 SRSSSHSSRRAKSVEDDAEGHLIYHVGDWLQE-RYEIVSTLGEGTSGRVVQCVDHRRGGTRVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHG----HMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLH-DNKLTHTDLKPENILFVN 299          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: DYR1A_XENLA (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus laevis GN=dyrk1a PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  278 KNG-----RYVVQSKLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHR-ELSIIHTDLKPENVLLLSKIDPSRDARK 745
            KNG     RY + S +G G F  V   +D     +VA+K+ K+ + +   A  E+++L+ +   D + K  +V L  HF        H+C+VFE L  NL  L++ T++RGV L+  ++    +   L +L   ELSIIH DLKPEN+LL    +P R A K
Sbjct:  142 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIK 296          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: DYR1A_RAT (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Rattus norvegicus GN=Dyrk1a PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  278 KNG-----RYVVQSKLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHR-ELSIIHTDLKPENVLLLSKIDPSRDARK 745
            KNG     RY + S +G G F  V   +D     +VA+K+ K+ + +   A  E+++L+ +   D + K  +V L  HF        H+C+VFE L  NL  L++ T++RGV L+  ++    +   L +L   ELSIIH DLKPEN+LL    +P R A K
Sbjct:  150 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIK 304          
BLAST of EY732282 vs. ExPASy Swiss-Prot
Match: DYR1A_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Mus musculus GN=Dyrk1a PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  278 KNG-----RYVVQSKLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGVPLHTVKEICYYILVGLDYLHR-ELSIIHTDLKPENVLLLSKIDPSRDARK 745
            KNG     RY + S +G G F  V   +D     +VA+K+ K+ + +   A  E+++L+ +   D + K  +V L  HF        H+C+VFE L  NL  L++ T++RGV L+  ++    +   L +L   ELSIIH DLKPEN+LL    +P R A K
Sbjct:  150 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIK 304          
The following BLAST results are available for this feature:
BLAST of EY732282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
DYRK2_CHICK7.551e-1837.59Dual specificity tyrosine-phosphorylation-regulate... [more]
CLK3_RAT1.682e-1733.51Dual specificity protein kinase CLK3 OS=Rattus nor... [more]
CLK3_MOUSE1.682e-1733.51Dual specificity protein kinase CLK3 OS=Mus muscul... [more]
CLK3_HUMAN1.682e-1733.51Dual specificity protein kinase CLK3 OS=Homo sapie... [more]
CLK3_BOVIN1.682e-1733.51Dual specificity protein kinase CLK3 OS=Bos taurus... [more]
DYR1A_XENTR2.197e-1735.80Dual specificity tyrosine-phosphorylation-regulate... [more]
CLK2_MOUSE2.197e-1732.20Dual specificity protein kinase CLK2 OS=Mus muscul... [more]
DYR1A_XENLA2.869e-1735.80Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_RAT2.869e-1735.80Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_MOUSE2.869e-1735.80Dual specificity tyrosine-phosphorylation-regulate... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-059-E09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732282 ID=EY732282; Name=EY732282; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGAATCAACTTCCATCAAAGCTTGTCTAGTTCAAGATTCAA
TCCGAGTCGTCTTTAATTCTTTTGCTTTGTTAGAAATCTGAAGAAATATT
TTGATCTTTATCTTGTTCTTGAAGAAGCCGCCAAAGAGACCATATTTTGT
GTATAAACTAATGGCGGAGGATAAGCATGGGGATCCAAGTGAGTTGAGTG
ATTATACGTCAGAGGATGAGGGAACCGAGGATTACAGGAGAGGAGGTTAC
CATGCGGTGCGTATTGGTGATACTTTCAAGAATGGTCGATATGTTGTTCA
GAGCAAGCTTGGCTGGGGCCATTTCTCTACTGTTTGGCTCACTTGGGACA
CTCAAACTTCTCATTATGTAGCTTTGAAAGTCCAGAAGAGTGCTCAGCAC
TACACTGAGGCAGCCATGGACGAGATAAAGATCCTCAAGCAGATCGCTGA
TGGAGACCCAGATGATAAAAAGTGTGTGGTGAAGCTTTTAGATCACTTTA
AGCATTCAGGGCCCAATGGGCAGCACGTTTGTATGGTTTTTGAGTACTTG
GGAGATAATCTTTTGACGCTTATTAAGTATACTGATTATCGAGGGGTTCC
TTTACACACGGTCAAAGAAATTTGTTACTATATTTTAGTGGGTTTGGATT
ATTTGCATCGCGAGCTTTCAATTATTCACACTGATTTGAAGCCAGAGAAT
GTATTGCTCTTGTCAAAAATTGATCCATCTAGAGATGCCCGCAAATCAGG
TGTTCCCCTCATCCTTCCTACCAAAACGGATAAAGTTGTGACAGAATCTA
GTGCTTCAAAAGAGATAAGAAGTCTTATGGGGATCTGACCCAGACCAAAA
AAA
back to top