EY732275

Overview
NameEY732275
Unique NameEY732275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_HUMAN (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Homo sapiens GN=ADI1 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.140e-41
Identity = 73/115 (63.48%), Postives = 92/115 (80.00%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQA 494
            D++ +C +K+ NYEEK+K FY EH+H D+EIRY L+GSGYFDVRD+ DQWIRI+++ GD++ LPAGIYHRFT+D  NY K MRLFVGEPVWTAYNRP +   AR +Y+K L   A
Sbjct:   65 DIITICKDKLPNYEEKIKMFYEEHLHLDDEIRYILDGSGYFDVRDKEDQWIRIFMEKGDMVTLPAGIYHRFTVDEKNYTKAMRLFVGEPVWTAYNRPADHFEARGQYVKFLAQTA 179          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_RAT (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Rattus norvegicus GN=Adi1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.795e-41
Identity = 75/115 (65.22%), Postives = 91/115 (79.13%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQA 494
            D++ +C + + NYEEK+K F+ EH+H DEEIRY LEGSGYFDVRD+ D+WIRI ++ GD+I LPAGIYHRFTLD  NYVK MRLFVGEPVWT YNRP +   AR +Y+K L G A
Sbjct:   65 DIITICKDSLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNRPADHFDARVQYVKFLEGTA 179          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD3_ORYSJ (Putative 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Oryza sativa subsp. japonica GN=ARD3 PE=3 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 8.132e-41
Identity = 70/111 (63.06%), Postives = 92/111 (82.88%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGL 482
            D+++L PEK+ NYE  +K F+ EH+H DEE+RYCL+GSGYFDVRDE+D+W+R+ ++ G LIV+PAGIYHRFTLDT+NY+K MRLF G P WTAYNRP +  P RK+Y++ L
Sbjct:   78 DIVELTPEKMPNYEVMIKRFFEEHLHTDEEVRYCLDGSGYFDVRDENDKWVRVSVRKGALIVVPAGIYHRFTLDTNNYIKTMRLFSGGPDWTAYNRPHDHLPERKKYLEAL 188          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_MOUSE (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Mus musculus GN=Adi1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.366e-40
Identity = 74/115 (64.35%), Postives = 90/115 (78.26%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQA 494
            D++ +C + + NYEEK+K F+ EH+H DEEIRY LEGSGYFDVRD+ D+WIRI ++ GD+I LPAGIYHRFTLD  NYVK MRLFVGEPVWT YNRP +   AR +Y+  L G A
Sbjct:   65 DIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNRPADHFDARVQYMSFLEGTA 179          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_DANRE (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Danio rerio GN=adi1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.036e-40
Identity = 73/111 (65.77%), Postives = 87/111 (78.38%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGL 482
            D++ + P+K+ +Y+ KLK FY EH+H D+EIRY LEGS YFDVRDE D+WIRI +  GDLI LPAGIYHRFT+D SNY K MRLFVGEPVW AYNRP +D   RKEY+  L
Sbjct:   68 DIITIHPDKLPDYQNKLKMFYEEHLHLDDEIRYILEGSSYFDVRDEGDRWIRIAVSKGDLITLPAGIYHRFTVDESNYTKAMRLFVGEPVWKAYNRPADDFDIRKEYVNSL 178          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_XENTR (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Xenopus tropicalis GN=adi1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.884e-40
Identity = 72/112 (64.29%), Postives = 93/112 (83.04%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLT 485
            D++ +  + + NYEEKLK FY EH+H D+EIRY LEGSGYFDVRD+ D+WIRI+++ GD+I LPAGIYHRFTLD +NYVK MRLFVG+PVWT YNRP ++  AR++Y++ LT
Sbjct:   65 DIITIHKDTLPNYEEKLKIFYEEHLHLDDEIRYILEGSGYFDVRDKEDRWIRIFMQKGDMITLPAGIYHRFTLDENNYVKAMRLFVGDPVWTPYNRPADNFEAREKYVQFLT 176          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_XENLA (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Xenopus laevis GN=adi1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.612e-39
Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQA 494
            D++ +  + + NYEEKLK FY EH+H D+EIRY LEGSGYFDVRD+ D+WIRI+++ GD+I LPAGIYHRFTLD +NYVK MRLFVG+PVWT +NRP ++  AR++Y++ L   A
Sbjct:   65 DIITIHKDTMPNYEEKLKIFYEEHLHLDDEIRYILEGSGYFDVRDQKDKWIRIFMQKGDMITLPAGIYHRFTLDENNYVKAMRLFVGDPVWTPFNRPADNCEAREKYVQFLAQTA 179          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_BOVIN (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Bos taurus GN=ADI1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.612e-39
Identity = 71/115 (61.74%), Postives = 90/115 (78.26%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQA 494
            D++ +  +K+ NYEEK+K F+ EH+H DEEIRY L+GSGYFDVRD+ D+WIRI ++ GD+I LPAGIYHRFTLD  NYVK MRLFVG+PVWT YNRP +   AR +Y++ L   A
Sbjct:   65 DIITISKDKLPNYEEKIKMFFEEHLHLDEEIRYILDGSGYFDVRDQEDRWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGDPVWTPYNRPSDHLEARTQYLEFLAQSA 179          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_DROME (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Drosophila melanogaster GN=CG32068 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.940e-34
Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 3
Query:  165 CPEK-VTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIK 476
            C EK + +Y  KLK F+TEH+H DEEIR  LEGSGYFDVRD  D W+RI +  GDLI++PAGIYHRFTLDT+N+++  R FVGEPVW  +NRP ++   RK YIK
Sbjct:   70 CSEKCLPDYANKLKAFFTEHLHTDEEIRLILEGSGYFDVRDNEDNWLRIKVVKGDLIIIPAGIYHRFTLDTNNFIRTRRYFVGEPVWAPHNRPADEMDCRKSYIK 174          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_YEAST (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Saccharomyces cerevisiae GN=ADI1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.899e-30
Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = 3
Query:  144 NWDLLDLCP---EKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDES--DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQ--EDHPARKEYI 473
            N D++++C    +    + EKL  FY EH+H DEEIRYCLEG+GYFDVRD S  + WIR  +++GDL++LP GIYHRFTL TSN++K +RLF  EP W A NR    +  P RK+YI
Sbjct:   57 NRDVVNICEGSFKSEAEFNEKLATFYQEHLHEDEEIRYCLEGAGYFDVRDASTPENWIRCLVESGDLLILPPGIYHRFTLTTSNHIKALRLFKDEPKWQAINRSNQADSLPVRKDYI 173          
The following BLAST results are available for this feature:
BLAST of EY732275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
MTND_HUMAN2.140e-4163.481,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_RAT2.795e-4165.221,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD3_ORYSJ8.132e-4163.06Putative 1,2-dihydroxy-3-keto-5-methylthiopentene ... [more]
MTND_MOUSE2.366e-4064.351,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DANRE4.036e-4065.771,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_XENTR6.884e-4064.291,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_XENLA7.612e-3961.741,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_BOVIN7.612e-3961.741,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DROME1.940e-3461.901,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_YEAST2.899e-3053.851,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-059-D09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732275 ID=EY732275; Name=EY732275; organism=Citrus sinensis; type=EST; length=623bp
CCACGCGTCCGCATTTTTGCTTTATTATTTTCTAATTTTTCCATTCATAC
AAGGCTCTATTGGGTGCCGTGGGTTGGCTTGAAGGTCACGGCTGCTGTGA
ATGAGAGCTTAGCCCATGAGGAGTATAATTGTCTTTTTGATAAAATTGGG
ATTTGCTTGATTTATGTCCGGAGAAAGTGACTAACTATGAGGAGAAGCTG
AAGAACTTTTACACGGAGCACATCCATGCCGACGAAGAGATACGCTACTG
TTTGGAAGGAAGTGGATATTTTGATGTTAGAGACGAGAGTGATCAGTGGA
TTCGAATCTGGATCAAAGCGGGTGATCTAATCGTTCTGCCAGCTGGAATC
TACCATCGTTTCACTCTTGACACTAGTAACTATGTTAAGTTGATGAGGTT
GTTTGTGGGAGAACCAGTGTGGACGGCATATAATCGGCCACAGGAGGATC
ATCCTGCCAGAAAGGAGTACATCAAAGGTTTGACTGGGCAGGCAGGGGTG
CCAGTTGAAGCTCATTAGAGTTTGAGAGTACTTTACCATTTACACTTGTG
TATGTGTATGTTAATGTAACTATATTTATATAGACTTCTGATAAACCACA
TTTAGCTAAAAAAAAAAAAAAAA
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