EY732275

Overview
NameEY732275
Unique NameEY732275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_SCHPO (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Schizosaccharomyces pombe GN=adi1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.256e-25
Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 3
Query:  186 YEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNR---PQEDHPARKEYIKGL 482
            Y+  +K F+ EH+H DEEIR  L+G+GYFDVR   D+W+RI+++ GDLI+LP GIYHRFT  T +Y+  MRLF   P W A +R     E+  ARK Y+  +
Sbjct:   71 YDNMVKKFFEEHLHEDEEIRLILDGNGYFDVRSVDDRWVRIFVEKGDLIILPPGIYHRFTTTTDDYIHAMRLFHENPKWIALSRTDSTSEELDARKSYLNSI 172          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_DICDI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Dictyostelium discoideum GN=adi1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.304e-22
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  189 EEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNR 437
            E+KLK F+ EH+H DEEIR+ L+G G+FD+RD++D+W++I  K GDLI++PA +YHRF LD S  +  MRLF   P W   NR
Sbjct:   64 EDKLKIFFEEHLHDDEEIRFILDGCGFFDIRDKNDKWVKIKEKKGDLIIVPANMYHRFALDESRNIHAMRLFTDAPKWVPINR 146          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_DELAS (Acireductone dioxygenase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=mtnD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.036e-11
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 3
Query:  189 EEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 428
            +E L+ F   H HAD+E+RY LEG G F   D   Q   + ++ GD + +PAG+ HRFTL  +  +K +RLF     W A
Sbjct:   83 DEALERFDKPHTHADDEVRYILEGEGLFGFFDAGGQERVLRVQPGDYLRIPAGVEHRFTLTATRRIKALRLFADTAGWVA 162          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_SULSY (Acireductone dioxygenase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=mtnD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 3
Query:  171 EKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA-YN 434
            EK  N +  +  F  EH H D+E+R+ ++GSG F V+ E D  + I ++AG+LIV+PAG  H F LD +  +K +R+F     W A YN
Sbjct:   83 EKTPNLDGLMAKFKREHHHIDDEVRFVVDGSGIFPVKIE-DDIVDIHVEAGELIVVPAGARHWFELDENRKIKCIRVFKTPAGWEAIYN 170          
The following BLAST results are available for this feature:
BLAST of EY732275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
MTND_SCHPO6.256e-2550.001,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DICDI1.304e-2254.221,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DELAS1.036e-1141.25Acireductone dioxygenase OS=Delftia acidovorans (s... [more]
MTND_SULSY1.767e-1141.57Acireductone dioxygenase OS=Sulfurihydrogenibium s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-059-D09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732275 ID=EY732275; Name=EY732275; organism=Citrus sinensis; type=EST; length=623bp
CCACGCGTCCGCATTTTTGCTTTATTATTTTCTAATTTTTCCATTCATAC
AAGGCTCTATTGGGTGCCGTGGGTTGGCTTGAAGGTCACGGCTGCTGTGA
ATGAGAGCTTAGCCCATGAGGAGTATAATTGTCTTTTTGATAAAATTGGG
ATTTGCTTGATTTATGTCCGGAGAAAGTGACTAACTATGAGGAGAAGCTG
AAGAACTTTTACACGGAGCACATCCATGCCGACGAAGAGATACGCTACTG
TTTGGAAGGAAGTGGATATTTTGATGTTAGAGACGAGAGTGATCAGTGGA
TTCGAATCTGGATCAAAGCGGGTGATCTAATCGTTCTGCCAGCTGGAATC
TACCATCGTTTCACTCTTGACACTAGTAACTATGTTAAGTTGATGAGGTT
GTTTGTGGGAGAACCAGTGTGGACGGCATATAATCGGCCACAGGAGGATC
ATCCTGCCAGAAAGGAGTACATCAAAGGTTTGACTGGGCAGGCAGGGGTG
CCAGTTGAAGCTCATTAGAGTTTGAGAGTACTTTACCATTTACACTTGTG
TATGTGTATGTTAATGTAACTATATTTATATAGACTTCTGATAAACCACA
TTTAGCTAAAAAAAAAAAAAAAA
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