EY756345

Overview
NameEY756345
Unique NameEY756345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A1_DANRE (Protein transport protein Sec61 subunit alpha-like 1 OS=Danio rerio GN=sec61al1 PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 2.111e-42
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAVIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_PAGBO (Protein transport protein Sec61 subunit alpha OS=Pagothenia borchgrevinki GN=sec61a PE=2 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 2.758e-42
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_NOTAN (Protein transport protein Sec61 subunit alpha OS=Notothenia angustata GN=sec61a PE=2 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 2.758e-42
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_HARAN (Protein transport protein Sec61 subunit alpha OS=Harpagifer antarcticus GN=sec61a PE=2 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 2.758e-42
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_DISMA (Protein transport protein Sec61 subunit alpha OS=Dissostichus mawsoni GN=sec61a PE=2 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 2.758e-42
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_BORSA (Protein transport protein Sec61 subunit alpha OS=Boreogadus saida GN=sec61a PE=2 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 2.758e-42
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_GADOC (Protein transport protein Sec61 subunit alpha OS=Gadus ogac GN=sec61a PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 3.601e-42
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHASIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A2_PONAB (Protein transport protein Sec61 subunit alpha isoform 2 OS=Pongo abelii GN=SEC61A2 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.601e-42
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G  G
Sbjct:  357 DPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A2_MOUSE (Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus GN=Sec61a2 PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 3.601e-42
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G  G
Sbjct:  357 DPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 472
[Close]
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A2_HUMAN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 3.601e-42
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1 
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G  G
Sbjct:  357 DPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 472
The following BLAST results are available for this feature:
BLAST of EY756345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
S61A1_DANRE2.111e-4273.50Protein transport protein Sec61 subunit alpha-like... [more]
SC61A_PAGBO2.758e-4273.50Protein transport protein Sec61 subunit alpha OS=P... [more]
SC61A_NOTAN2.758e-4273.50Protein transport protein Sec61 subunit alpha OS=N... [more]
SC61A_HARAN2.758e-4273.50Protein transport protein Sec61 subunit alpha OS=H... [more]
SC61A_DISMA2.758e-4273.50Protein transport protein Sec61 subunit alpha OS=D... [more]
SC61A_BORSA2.758e-4273.50Protein transport protein Sec61 subunit alpha OS=B... [more]
SC61A_GADOC3.601e-4273.50Protein transport protein Sec61 subunit alpha OS=G... [more]
S61A2_PONAB3.601e-4273.50Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_MOUSE3.601e-4273.50Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_HUMAN3.601e-4273.50Protein transport protein Sec61 subunit alpha isof... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-E09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756345 ID=EY756345; Name=EY756345; organism=Citrus sinensis; type=EST; length=509bp
CCACGCGTCCGGGCAGCCAATCCTTTCCATGCTCTGTTCTACCTGGTTTT
TATGCTTACTGCTTGTGCTCTTTTCTCGAAAACTTGGATTGAAGTTTCAG
GGTCTTCTGCCCGGGATGTGGCCAAGCAGCTTAAGGAGCAACAAATGGTG
ATGCCTGGACATACATACTCAAATCTTCAAAAGGAACTGAACCGGAACAT
ACCAACTGCTGCTGCCTTTGGGGGAGTGTGCATTGGTGCATTAACAGTCC
TGGATGATTTCATGGGAGCAATTGGGTCAGGAACTGGGATATTGCTCGCA
GTTACGATCATATATCAGTACTTTGAGACCTTTGAGAAGGAGAGAGCTAG
CGAACTTGGCTTCTTTGGCTTTTAATACACCAATGATCTTGAGTTTCAGA
TTACCTGGTGAGTAATATTGGGCAATATTGTTGCAGAATTCAAAGACTTA
ACATAGGCCATGGCTTGTTAACACCTATGAATAGAGATTCAGATCAGTCT
GTAGTTTGG
back to top