EY756345

Overview
NameEY756345
Unique NameEY756345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A2_BOVIN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Bos taurus GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 3.601e-42
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G  G
Sbjct:  357 DPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_HEMAM (Protein transport protein Sec61 subunit alpha OS=Hemitripterus americanus GN=sec61a PE=2 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 8.023e-42
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAGIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_HALRO (Protein transport protein Sec61 subunit alpha OS=Halocynthia roretzi PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.023e-42
Identity = 86/117 (73.50%), Postives = 98/117 (83.76%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P H L Y+ FML +CA FSKTWIEVSGS+A+DVAKQLKEQQMVM GH   ++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G  G
Sbjct:  356 DPIHGLLYITFMLGSCAFFSKTWIEVSGSAAKDVAKQLKEQQMVMRGHREKSMIHELNRYIPTAAAFGGLCIGALSVLADFIGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 471          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A2_ONCMY (Protein transport protein Sec61 subunit alpha isoform B OS=Oncorhynchus mykiss GN=sec61ab PE=2 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 8.023e-42
Identity = 85/117 (72.65%), Postives = 98/117 (83.76%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+ FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPIHAAIYICFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_PYRSA (Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.029e-38
Identity = 74/105 (70.48%), Postives = 93/105 (88.57%), Query Frame = 1
Query:   16 ANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFET 330
            ++P HAL Y++F+L +CALFSKTWI+VSG+SA DV+KQL++QQMVM G   S++Q+ELNR IPTAAAFGG+CIGAL+++ DFMGAIGSGTGILLAVT IYQ +ET
Sbjct:  361 SDPVHALLYIIFILASCALFSKTWIQVSGTSASDVSKQLRDQQMVMKGFRASSMQRELNRYIPTAAAFGGMCIGALSIVADFMGAIGSGTGILLAVTTIYQSWET 465          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_NEUCR (Protein transport protein SEC61 subunit alpha OS=Neurospora crassa GN=sec-61 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 7.771e-37
Identity = 75/108 (69.44%), Postives = 85/108 (78.70%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P H   Y+ +MLTACA+FSKTWIEVSGSS RDVAKQLK+Q +VM GH   ++ KEL R IPTAAAFGG CIGAL+V  D MGA+GSGTG LLAVTIIY YFE   KE
Sbjct:  357 DPIHTAVYIAYMLTACAVFSKTWIEVSGSSPRDVAKQLKDQGLVMAGHREQSMYKELKRIIPTAAAFGGACIGALSVASDLMGALGSGTGTLLAVTIIYGYFEIAAKE 464          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_SCHPO (Protein transport protein sec61 subunit alpha OS=Schizosaccharomyces pombe GN=sec61 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.162e-30
Identity = 63/108 (58.33%), Postives = 76/108 (70.37%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P H L Y+ F + ACALFSK WIEVSG+S RDVAKQLK QQ+VM GH   ++ KEL R IPTAA   G  +GAL V  D +GA+GSGT +LL  T IY Y+E  +KE
Sbjct:  357 DPIHTLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKELKRIIPTAAWLSGAVVGALAVASDLLGALGSGTAVLLCTTTIYGYYEQLQKE 464          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_YARLI (Protein transport protein SEC61 subunit alpha OS=Yarrowia lipolytica GN=SEC61 PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 9.201e-30
Identity = 64/109 (58.72%), Postives = 79/109 (72.48%), Query Frame = 1
Query:   16 ANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            A+P   + Y+ F+L  CA+FS TWIE+SGSS RDVAKQ KEQ +V+ G   ++  KEL R IPTAAAFGG  IGAL+V  D +GA+ SGTGIL+AVT IY Y+E   KE
Sbjct:  356 ADPVKTVIYIAFVLGVCAVFSATWIEISGSSPRDVAKQFKEQGLVIAGRRETSAYKELKRIIPTAAAFGGATIGALSVASDLLGALSSGTGILMAVTTIYGYYEMAAKE 464          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_HANAN (Protein transport protein SEC61 subunit alpha OS=Hansenula anomala GN=SEC61 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.677e-29
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P   + Y+ F+L+ CALFSKTWIE+SG++ RDVAKQ K+Q +V+ G   +++ KEL R IPTAAAFGG  IGAL+V  D +G +GSGT ILLAVT IY Y+E   KE
Sbjct:  357 DPIKTVIYVSFVLSVCALFSKTWIEISGTAPRDVAKQFKDQGLVIAGRRETSVYKELKRIIPTAAAFGGASIGALSVACDLLGTLGSGTSILLAVTTIYSYYEIAAKE 464          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_DEBHA (Protein transport protein SEC61 subunit alpha OS=Debaryomyces hansenii GN=SEC61 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.496e-29
Identity = 61/108 (56.48%), Postives = 80/108 (74.07%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P   + Y++F+L +CA+FS TWIE+SG+S RDVAKQ KEQ +V+ GH  ++  +EL + IPTAAAFGG  IGAL+V  D MG +GSGT ILL+VT IY Y+E   KE
Sbjct:  357 DPIKTIIYIIFVLGSCAVFSTTWIEISGASPRDVAKQFKEQGLVIAGHRDTSAYRELKKIIPTAAAFGGATIGALSVFCDLMGTLGSGTSILLSVTTIYGYYELAMKE 464          
The following BLAST results are available for this feature:
BLAST of EY756345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
S61A2_BOVIN3.601e-4273.50Protein transport protein Sec61 subunit alpha isof... [more]
SC61A_HEMAM8.023e-4273.50Protein transport protein Sec61 subunit alpha OS=H... [more]
SC61A_HALRO8.023e-4273.50Protein transport protein Sec61 subunit alpha OS=H... [more]
S61A2_ONCMY8.023e-4272.65Protein transport protein Sec61 subunit alpha isof... [more]
SC61A_PYRSA7.029e-3870.48Protein transport protein Sec61 subunit alpha OS=P... [more]
SC61A_NEUCR7.771e-3769.44Protein transport protein SEC61 subunit alpha OS=N... [more]
SC61A_SCHPO3.162e-3058.33Protein transport protein sec61 subunit alpha OS=S... [more]
SC61A_YARLI9.201e-3058.72Protein transport protein SEC61 subunit alpha OS=Y... [more]
SC61A_HANAN2.677e-2957.41Protein transport protein SEC61 subunit alpha OS=H... [more]
SC61A_DEBHA3.496e-2956.48Protein transport protein SEC61 subunit alpha OS=D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-E09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756345 ID=EY756345; Name=EY756345; organism=Citrus sinensis; type=EST; length=509bp
CCACGCGTCCGGGCAGCCAATCCTTTCCATGCTCTGTTCTACCTGGTTTT
TATGCTTACTGCTTGTGCTCTTTTCTCGAAAACTTGGATTGAAGTTTCAG
GGTCTTCTGCCCGGGATGTGGCCAAGCAGCTTAAGGAGCAACAAATGGTG
ATGCCTGGACATACATACTCAAATCTTCAAAAGGAACTGAACCGGAACAT
ACCAACTGCTGCTGCCTTTGGGGGAGTGTGCATTGGTGCATTAACAGTCC
TGGATGATTTCATGGGAGCAATTGGGTCAGGAACTGGGATATTGCTCGCA
GTTACGATCATATATCAGTACTTTGAGACCTTTGAGAAGGAGAGAGCTAG
CGAACTTGGCTTCTTTGGCTTTTAATACACCAATGATCTTGAGTTTCAGA
TTACCTGGTGAGTAATATTGGGCAATATTGTTGCAGAATTCAAAGACTTA
ACATAGGCCATGGCTTGTTAACACCTATGAATAGAGATTCAGATCAGTCT
GTAGTTTGG
back to top