EY756345

Overview
NameEY756345
Unique NameEY756345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1118 contig Csv1_Contig1118:579..1087. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_CANGA (Protein transport protein SEC61 subunit alpha OS=Candida glabrata GN=SEC61 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.964e-29
Identity = 63/108 (58.33%), Postives = 78/108 (72.22%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P   + Y  F+L  CALFSKTWIE+SG+SA+DVAKQ KEQ MV+ G   +++ KEL + IPTAAAFGG  IGAL+V  D +GA+GSG  ILLA T IY Y+E   KE
Sbjct:  357 DPIKTVIYTAFVLGTCALFSKTWIEISGTSAKDVAKQFKEQGMVINGKRETSVYKELKKIIPTAAAFGGATIGALSVGSDLLGALGSGASILLATTTIYGYYEVAAKE 464          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_KLULA (Protein transport protein SEC61 subunit alpha OS=Kluyveromyces lactis GN=SEC61 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.960e-28
Identity = 61/108 (56.48%), Postives = 78/108 (72.22%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P   + Y+ F+L ACALFSKTWIE+SG+S RDVAKQ K+Q + + G   +N+ KEL + IPTAAAFGG  IGAL+V  D +G +GSGT IL+A T IY Y+E   KE
Sbjct:  358 DPIKTVVYVGFVLGACALFSKTWIEISGTSPRDVAKQFKDQGLTINGKRETNVYKELKKIIPTAAAFGGAVIGALSVGSDLLGTLGSGTSILMATTTIYGYYEVAAKE 465          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_ASHGO (Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii GN=SEC61 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.049e-28
Identity = 59/108 (54.63%), Postives = 80/108 (74.07%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P   + Y+ F+L ACA+FS+TWI+VSG+S RDV+KQ KEQ +V+ G   +++ +EL + IPTAAAFGG  IGAL+V  D +G +GSGT IL+A T IY Y+ET  KE
Sbjct:  358 DPIKTVVYVTFVLGACAMFSRTWIDVSGTSPRDVSKQFKEQGLVINGRRETSVYRELKKVIPTAAAFGGATIGALSVGSDLLGTLGSGTSILMATTTIYGYYETAAKE 465          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_CANAL (Protein transport protein SEC61 subunit alpha OS=Candida albicans GN=SEC61 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.469e-27
Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P     Y+ F+L +CA+FS TWIE+SG+S RDVAKQ KEQ +V+ GH  ++  KEL + I  AAAFGG  IGAL+V+ D MG +GSGT ILLAVT IY Y+E   KE
Sbjct:  357 DPIKTTIYIAFVLGSCAVFSTTWIEISGTSPRDVAKQFKEQGLVIAGHRDTSAYKELKKIIHIAAAFGGATIGALSVVCDLMGTLGSGTSILLAVTTIYGYYELAVKE 464          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_YEAST (Protein transport protein SEC61 OS=Saccharomyces cerevisiae GN=SEC61 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.919e-27
Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKE 342
            +P   + Y+ F+L +CA+FSKTWIE+SG+S RD+AKQ K+Q MV+ G   +++ +EL + IPTAAAFGG  IGAL+V  D +G +GSG  IL+A T IY Y+E   KE
Sbjct:  358 DPIKTIVYITFVLGSCAVFSKTWIEISGTSPRDIAKQFKDQGMVINGKRETSIYRELKKIIPTAAAFGGATIGALSVGSDLLGTLGSGASILMATTTIYGYYEAAAKE 465          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SECY_PYRFU (Preprotein translocase subunit secY OS=Pyrococcus furiosus GN=secY PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.186e-18
Identity = 43/115 (37.39%), Postives = 70/115 (60.87%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYS--NLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 357
            NP  A+ YL+  +    LF   W+E++G  AR +A+QL+   + +PG       L+K L R IP    +G + +  + VL DF+GA+G+GTGILL V I+Y+++E   +E+ +E+
Sbjct:  344 NPVRAIVYLILTVIFSLLFGYLWVELTGLDARSIARQLQRAGLQIPGFRRDPRTLEKVLQRYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQITEM 458          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SECY_METVA (Preprotein translocase subunit secY OS=Methanococcus vannielii GN=secY PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.079e-18
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   16 ANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYS--NLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 357
            ++P HA+FY + M+  C LF   W+E SG  A+ +AK+L    M + G   S  ++++ L R I      G   +G L    DF GA+G GTG+LL V+I+Y+ +E   +E+ SEL
Sbjct:  312 SDPLHAIFYTLMMVIFCILFGLFWVETSGLDAKSMAKKLGNLDMAIKGFRKSQKSIEQRLKRYIKPITVMGSAFVGFLAAAADFTGALGGGTGVLLTVSIVYRLYEQLVQEQLSEL 427          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SECY_PYRAB (Preprotein translocase subunit secY OS=Pyrococcus abyssi GN=secY PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.055e-17
Identity = 42/115 (36.52%), Postives = 71/115 (61.74%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYS--NLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 357
            NP  AL YL+  + +  +F   W+E++G  AR +A+QL+   + +PG       L++ L + IP    +G + +  + VL DF+GA+G+GTGILL V I+Y+++E   +E+ SE+
Sbjct:  344 NPVRALVYLILTVISSLIFGFLWVELTGLDARTIARQLQRAGLQIPGFRRDPRTLERVLQKYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQISEM 458          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SECY_PYRHO (Preprotein translocase subunit secY OS=Pyrococcus horikoshii GN=secY PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.351e-17
Identity = 41/115 (35.65%), Postives = 71/115 (61.74%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYS--NLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 357
            NP  A+ YL+  +    LF   W+E++G  AR +A+QL+   + +PG       L++ L + IP    +G + +  ++VL DF+GA+G+GTGILL V I+Y+++E   +E+ +E+
Sbjct:  344 NPVRAIIYLILTIIFSLLFGFLWVELTGLDARTIARQLQRAGLQIPGFRRDPRTLERVLQKYIPYVTFWGSLTVALISVLADFLGALGTGTGILLTVGILYRFYEEIAREQITEM 458          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SECY_METTH (Preprotein translocase subunit secY OS=Methanobacterium thermoautotrophicum GN=secY PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.351e-17
Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSN--LQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 357
            +PF  +FY V  +  C LF+  W+E+S    R VA+QL +  M +PG   S    +K L R IPT    GG  +G L  + D  G++G GTG+LL V I+Y+ +E   +E+  ++
Sbjct:  332 DPFRVVFYAVVFIGLCVLFAWLWVEISNIGPRHVARQLYQMGMQIPGFRSSRGQFEKILKRYIPTITILGGAFVGLLAFVADLTGSLGGGTGVLLTVGIVYRLYEEIAQEQLMDM 446          
The following BLAST results are available for this feature:
BLAST of EY756345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
SC61A_CANGA5.964e-2958.33Protein transport protein SEC61 subunit alpha OS=C... [more]
SC61A_KLULA2.960e-2856.48Protein transport protein SEC61 subunit alpha OS=K... [more]
SC61A_ASHGO5.049e-2854.63Protein transport protein SEC61 subunit alpha OS=A... [more]
SC61A_CANAL1.469e-2756.48Protein transport protein SEC61 subunit alpha OS=C... [more]
SC61A_YEAST1.919e-2752.78Protein transport protein SEC61 OS=Saccharomyces c... [more]
SECY_PYRFU6.186e-1837.39Preprotein translocase subunit secY OS=Pyrococcus ... [more]
SECY_METVA8.079e-1837.93Preprotein translocase subunit secY OS=Methanococc... [more]
SECY_PYRAB1.055e-1736.52Preprotein translocase subunit secY OS=Pyrococcus ... [more]
SECY_PYRHO2.351e-1735.65Preprotein translocase subunit secY OS=Pyrococcus ... [more]
SECY_METTH2.351e-1737.39Preprotein translocase subunit secY OS=Methanobact... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-E09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756345 ID=EY756345; Name=EY756345; organism=Citrus sinensis; type=EST; length=509bp
CCACGCGTCCGGGCAGCCAATCCTTTCCATGCTCTGTTCTACCTGGTTTT
TATGCTTACTGCTTGTGCTCTTTTCTCGAAAACTTGGATTGAAGTTTCAG
GGTCTTCTGCCCGGGATGTGGCCAAGCAGCTTAAGGAGCAACAAATGGTG
ATGCCTGGACATACATACTCAAATCTTCAAAAGGAACTGAACCGGAACAT
ACCAACTGCTGCTGCCTTTGGGGGAGTGTGCATTGGTGCATTAACAGTCC
TGGATGATTTCATGGGAGCAATTGGGTCAGGAACTGGGATATTGCTCGCA
GTTACGATCATATATCAGTACTTTGAGACCTTTGAGAAGGAGAGAGCTAG
CGAACTTGGCTTCTTTGGCTTTTAATACACCAATGATCTTGAGTTTCAGA
TTACCTGGTGAGTAATATTGGGCAATATTGTTGCAGAATTCAAAGACTTA
ACATAGGCCATGGCTTGTTAACACCTATGAATAGAGATTCAGATCAGTCT
GTAGTTTGG
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