EY756323

Overview
NameEY756323
Unique NameEY756323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length464
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_GUITH (40S ribosomal protein S29A OS=Guillardia theta GN=rps29A PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.280e-14
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            M H N+WN H +TYG GS  CR+CGN   +I KYGL  CRQCFR  +  +GF +YR
Sbjct:    1 MSHKNIWNKHSRTYGKGSRGCRICGNRSGLIRKYGLSICRQCFREKSQNLGFDKYR 56          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_RAT (40S ribosomal protein S29 OS=Rattus norvegicus GN=Rps29 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.626e-13
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLE 225
            MGH  ++ SHP+ +G GS +CRVC N H +I KYGL  CRQCFR YA +IGF++
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_PONAB (40S ribosomal protein S29 OS=Pongo abelii GN=RPS29 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.626e-13
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLE 225
            MGH  ++ SHP+ +G GS +CRVC N H +I KYGL  CRQCFR YA +IGF++
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_MOUSE (40S ribosomal protein S29 OS=Mus musculus GN=Rps29 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.626e-13
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLE 225
            MGH  ++ SHP+ +G GS +CRVC N H +I KYGL  CRQCFR YA +IGF++
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_HUMAN (40S ribosomal protein S29 OS=Homo sapiens GN=RPS29 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.626e-13
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLE 225
            MGH  ++ SHP+ +G GS +CRVC N H +I KYGL  CRQCFR YA +IGF++
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_BOVIN (40S ribosomal protein S29 OS=Bos taurus GN=RPS29 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.626e-13
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLE 225
            MGH  ++ SHP+ +G GS +CRVC N H +I KYGL  CRQCFR YA +IGF++
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_ASHGO (40S ribosomal protein S29 OS=Ashbya gossypii GN=RPS29 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.626e-13
Identity = 33/56 (58.93%), Postives = 38/56 (67.86%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            M H NVW SHP+ YG GS  CRVC +   +I KYGL  CRQCFR  A +IGF +YR
Sbjct:    1 MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_ICTPU (40S ribosomal protein S29 OS=Ictalurus punctatus GN=rps29 PE=3 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.124e-13
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLE 225
            MGH  ++ SHP+ +G GS +CRVC N H +I KYGL  CRQCFR YA +IGF++
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_HIPCM (40S ribosomal protein S29 OS=Hippocampus comes GN=rps29 PE=3 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.124e-13
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLE 225
            MGH  ++ SHP+ +G GS +CRVC N H +I KYGL  CRQCFR YA +IGF++
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_DROME (40S ribosomal protein S29 OS=Drosophila melanogaster GN=RpS29 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.124e-13
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGF 219
            MG + +W SHP+ YG GS  CR C N H +I KYGL  CRQCFR YA +IGF
Sbjct:    1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGF 52          
The following BLAST results are available for this feature:
BLAST of EY756323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
RS29_GUITH4.280e-1455.3640S ribosomal protein S29A OS=Guillardia theta GN=... [more]
RS29_RAT1.626e-1357.4140S ribosomal protein S29 OS=Rattus norvegicus GN=... [more]
RS29_PONAB1.626e-1357.4140S ribosomal protein S29 OS=Pongo abelii GN=RPS29... [more]
RS29_MOUSE1.626e-1357.4140S ribosomal protein S29 OS=Mus musculus GN=Rps29... [more]
RS29_HUMAN1.626e-1357.4140S ribosomal protein S29 OS=Homo sapiens GN=RPS29... [more]
RS29_BOVIN1.626e-1357.4140S ribosomal protein S29 OS=Bos taurus GN=RPS29 P... [more]
RS29_ASHGO1.626e-1358.9340S ribosomal protein S29 OS=Ashbya gossypii GN=RP... [more]
RS29_ICTPU2.124e-1357.4140S ribosomal protein S29 OS=Ictalurus punctatus G... [more]
RS29_HIPCM2.124e-1357.4140S ribosomal protein S29 OS=Hippocampus comes GN=... [more]
RS29_DROME2.124e-1359.6240S ribosomal protein S29 OS=Drosophila melanogast... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-C09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756323 ID=EY756323; Name=EY756323; organism=Citrus sinensis; type=EST; length=464bp
CCACGCGTCCGGAAGAGTGCGGCACCAGAGTACAGCAGAGCACGACAGGA
CAGGAGAGAAGAGATGGGTCACTCCAACGTATGGAATTCGCATCCCAAGA
CCTACGGCCCTGGATCTCCTGCTTGCCGCGTTTGCGGGAACCCTCATGCG
ATTATCATAAAGTACGGCCTCATGTGCTGCAGGCAGTGCTTCCGCAGCTA
CGCCTAGGAGATCGGTTTCCTCGAGTACCGCTGAAGAAGATGGCTGTCAA
GGCTTTGCAGTGGACTGTGGAGCATACCTACGAATGGAGAAATTTTCAGT
TTTCGTGTGATTTCTTTTTAGTTTTTCACAAGTAGCATAGAGCGTGTGAA
TCAATTAGAGCTTGAACTTTGTAGATGGATTTCTTTGCTGTCTTAATATG
ACTGCCAATCTTATTACTTGAATGTTCTCTTGNNCCTTTTGATGCGAGGT
TCCCTGAANATGCT
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