EY756323

Overview
NameEY756323
Unique NameEY756323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length464
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_NEUCR (40S ribosomal protein S29 OS=Neurospora crassa GN=rps-29 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.774e-13
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            M H +VWNS P+TYG GS +CRVC +   +I KYGL  CRQCFR  A +IGF ++R
Sbjct:    1 MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR 56          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_CULQU (40S ribosomal protein S29 OS=Culex quinquefasciatus GN=RpS29 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.623e-13
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGF 219
            MG +++W SHP+ YG GS  CR C N H +I KYGL  CRQCFR YA +IGF
Sbjct:    1 MGFADLWYSHPRKYGQGSRFCRACSNNHGMIRKYGLNICRQCFREYAKDIGF 52          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_MAGGR (40S ribosomal protein S29 OS=Magnaporthe grisea GN=RPS29 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.180e-13
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            M H +VWNS P+TYG G+ +CRVC +   +I KYGL  CRQCFR  A +IGF+++R
Sbjct:    1 MSHDSVWNSRPRTYGKGARSCRVCTHRAGLIRKYGLDICRQCFREKAADIGFVKHR 56          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29A_YEAST (40S ribosomal protein S29-A OS=Saccharomyces cerevisiae GN=RPS29A PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 8.072e-13
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            M H NVW SHP+ YG GS  CRVC +   +I KYGL  CRQCFR  A +IGF ++R
Sbjct:    1 MAHENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 56          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_PIG (40S ribosomal protein S29 OS=Sus scrofa GN=RPS29 PE=3 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 4.006e-12
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLE 225
            MG    + SHP+ +G GS +CRVC N H +I KYGL  CRQCFR YA +IGF++
Sbjct:    1 MGPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_CANGA (40S ribosomal protein S29 OS=Candida glabrata GN=RPS29 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.232e-12
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            M H NVW SHP+ +G GS  CRVC +   +I KY L  CRQCFR  A +IGF +YR
Sbjct:    1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLIRKYDLNICRQCFRERASDIGFNKYR 56          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29B_YEAST (40S ribosomal protein S29-B OS=Saccharomyces cerevisiae GN=RPS29B PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 6.833e-12
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            M H NVW SHP+ +G GS  CRVC +   ++ KY L  CRQCFR  A +IGF +YR
Sbjct:    1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 56          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_DICDI (40S ribosomal protein S29 OS=Dictyostelium discoideum GN=rps29 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.988e-11
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1
Query:   79 VWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            +W +HP+ +GPGS  CR CGN H II KY L  CR+CFR+ A  IGF +YR
Sbjct:    5 LWLTHPRNFGPGSRTCRKCGNHHGIIRKYDLNMCRRCFRTDAEAIGFNKYR 55          
BLAST of EY756323 vs. ExPASy Swiss-Prot
Match: RS29_DEBHA (40S ribosomal protein S29 OS=Debaryomyces hansenii GN=RPS29 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.391e-11
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 1
Query:   64 MGHSNVWNSHPKTYGPGSPACRVCGNPHAIIIKYGLMCCRQCFRSYA*EIGFLEYR 231
            M H +VW SHP+ +G GS  CRVC +   +I KY L  CRQCFR  A +IGF ++R
Sbjct:    1 MAHESVWFSHPRNFGKGSRQCRVCSSHSGLIRKYDLNICRQCFRERASDIGFNKFR 56          
The following BLAST results are available for this feature:
BLAST of EY756323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
RS29_NEUCR2.774e-1357.1440S ribosomal protein S29 OS=Neurospora crassa GN=... [more]
RS29_CULQU3.623e-1359.6240S ribosomal protein S29 OS=Culex quinquefasciatu... [more]
RS29_MAGGR6.180e-1355.3640S ribosomal protein S29 OS=Magnaporthe grisea GN... [more]
RS29A_YEAST8.072e-1357.1440S ribosomal protein S29-A OS=Saccharomyces cerev... [more]
RS29_PIG4.006e-1255.5640S ribosomal protein S29 OS=Sus scrofa GN=RPS29 P... [more]
RS29_CANGA5.232e-1255.3640S ribosomal protein S29 OS=Candida glabrata GN=R... [more]
RS29B_YEAST6.833e-1253.5740S ribosomal protein S29-B OS=Saccharomyces cerev... [more]
RS29_DICDI1.988e-1156.8640S ribosomal protein S29 OS=Dictyostelium discoid... [more]
RS29_DEBHA3.391e-1151.7940S ribosomal protein S29 OS=Debaryomyces hansenii... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-C09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756323 ID=EY756323; Name=EY756323; organism=Citrus sinensis; type=EST; length=464bp
CCACGCGTCCGGAAGAGTGCGGCACCAGAGTACAGCAGAGCACGACAGGA
CAGGAGAGAAGAGATGGGTCACTCCAACGTATGGAATTCGCATCCCAAGA
CCTACGGCCCTGGATCTCCTGCTTGCCGCGTTTGCGGGAACCCTCATGCG
ATTATCATAAAGTACGGCCTCATGTGCTGCAGGCAGTGCTTCCGCAGCTA
CGCCTAGGAGATCGGTTTCCTCGAGTACCGCTGAAGAAGATGGCTGTCAA
GGCTTTGCAGTGGACTGTGGAGCATACCTACGAATGGAGAAATTTTCAGT
TTTCGTGTGATTTCTTTTTAGTTTTTCACAAGTAGCATAGAGCGTGTGAA
TCAATTAGAGCTTGAACTTTGTAGATGGATTTCTTTGCTGTCTTAATATG
ACTGCCAATCTTATTACTTGAATGTTCTCTTGNNCCTTTTGATGCGAGGT
TCCCTGAANATGCT
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