EY756314

Overview
NameEY756314
Unique NameEY756314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7003 contig Csv1_Contig7003:111..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_MYRRU (Histone H4 OS=Myrmica ruginodis GN=His4 PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_MOUSE (Histone H4 OS=Mus musculus GN=Hist1h4a PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_MASBA (Histone H4 OS=Mastigamoeba balamuthi PE=3 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   21 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 108
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_MACFA (Histone H4 OS=Macaca fascicularis GN=QtsA-19327 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_HUMAN (Histone H4 OS=Homo sapiens GN=HIST1H4A PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_DROYA (Histone H4 OS=Drosophila yakuba GN=His4 PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_DROTE (Histone H4 OS=Drosophila teissieri GN=His4 PE=3 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_DROSI (Histone H4 OS=Drosophila simulans GN=His4 PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_DROSE (Histone H4 OS=Drosophila sechellia GN=His4 PE=3 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756314 vs. ExPASy Swiss-Prot
Match: H4_DROOR (Histone H4 OS=Drosophila orena GN=His4 PE=3 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:    5 ASGHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 268
            A  HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   16 AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
The following BLAST results are available for this feature:
BLAST of EY756314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
H4_MYRRU1.391e-4195.45Histone H4 OS=Myrmica ruginodis GN=His4 PE=3 SV=2[more]
H4_MOUSE1.391e-4195.45Histone H4 OS=Mus musculus GN=Hist1h4a PE=1 SV=2[more]
H4_MASBA1.391e-4195.45Histone H4 OS=Mastigamoeba balamuthi PE=3 SV=3[more]
H4_MACFA1.391e-4195.45Histone H4 OS=Macaca fascicularis GN=QtsA-19327 PE... [more]
H4_HUMAN1.391e-4195.45Histone H4 OS=Homo sapiens GN=HIST1H4A PE=1 SV=2[more]
H4_DROYA1.391e-4195.45Histone H4 OS=Drosophila yakuba GN=His4 PE=3 SV=2[more]
H4_DROTE1.391e-4195.45Histone H4 OS=Drosophila teissieri GN=His4 PE=3 SV... [more]
H4_DROSI1.391e-4195.45Histone H4 OS=Drosophila simulans GN=His4 PE=3 SV=... [more]
H4_DROSE1.391e-4195.45Histone H4 OS=Drosophila sechellia GN=His4 PE=3 SV... [more]
H4_DROOR1.391e-4195.45Histone H4 OS=Drosophila orena GN=His4 PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-B12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756314 ID=EY756314; Name=EY756314; organism=Citrus sinensis; type=EST; length=511bp
CCACGCGTCCGGTCACCGTAAGGTTCTTCGCGATAACATTCAGGGAATCA
CAAAGCCCGCAATCCGGCGTCTGGCTCGTCGGGGTGGGGTGAAGCGTATC
AGTGGGTTGATCTACGAGGAGACACGTGGCGTTCTGAAGATCTTTTTGGA
GAACGTCATCCGCGACGCCGTGACTTACACTGAGCACGCTCGGAGGAAGA
CTGTGACGGCGATGGACGTCGTGTACGCGCTCAAGAGGCAGGGCAGGACT
CTCTATGGGTTTGGTGGTTAAAGAAGTTGGTATCGCTTGTTTGTGATGGT
TGTAAAGAGAGAAGTCTTGCTGTCAAGAAGCTTTTGTGGTTCTGTTTCTA
GGGTTAGGACTTGTGCGTTTTCTTTCTGGTTAAATGGGAATCTTGGTTTA
ATTTGTTAATGGTGTTTTCATTTTGTAACGTTAATTACCCCTATGATTTT
GAGTAGAATTAACGATAGATCGTTGTGAAGCTTCTTGGTATAAACACTGC
TGGTTCATTTG
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