EY756300

Overview
NameEY756300
Unique NameEY756300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756300 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11
Identity = 60/202 (29.70%), Postives = 89/202 (44.06%), Query Frame = 3
Query:  111 DSFSLGSFKAYLAEFISTLLFVFAGVGSA-IAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANIPGAGPFSGGS*TXXRPSGLPLPAATF 713
            D F     K  ++E ++T L VF   G+A I+ + ++  + L  S      I  G  + V +    +ISG H+NPAVT   A+      +   FYW AQ  G+I ASF+LK V   + V                     TF +++   A A D +  ++G +A +A+G  V      AG  SGGS    R  G  L +  F
Sbjct:   41 DFFPPHLLKKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQS------IAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVDV-IGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTR--AVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNKF 233          
BLAST of EY756300 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 73/225 (32.44%), Postives = 89/225 (39.56%), Query Frame = 3
Query:  135 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS----------GL---VAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLL-------KVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPK--KGSLGTIAPIAIGFIVGANIPGAGPFSGGS*TXXRPSGLPLPAATFRTLDLLGWPS 743
            K  +AEFI T + VF G GSA A   M A     P+          GL   VAI +  GFA+  ++    NISG H+NPAVT GL    +      + Y IAQLLG+   SF+            GGL                       TF L+ T+   A D +  KG  G    I IG  V   I   G  SG S    R  G  L    F   DL  + S
Sbjct:    6 KRCIAEFIGTFILVFFGAGSA-AVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATA--PFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAG----IIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYS 223          
BLAST of EY756300 vs. ExPASy Swiss-Prot
Match: AQP2_MACPR (Aquaporin-2 (Fragment) OS=Macroscelides proboscideus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 3
Query:  120 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 449
            S+   +A  +EF++TLLFVF G+GSA+ +      + +    ++ I++  G A+   V    +ISG H+NPAVT    +G  ++ L   FY  AQLLG++  + LL  +T
Sbjct:    1 SIAFSRAVFSEFLATLLFVFFGLGSALNW-----PSTVPIPTVLQISMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYVAAQLLGAVAGAALLHKLT 105          
BLAST of EY756300 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11
Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 3
Query:  135 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALF-VAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG 455
            K Y AE I T    FAG GSA+    + A       GLV +++  G ++  +A AIG +ISG H+NPAVT GLA GG+      + Y IAQ+ G+IVA+ LL ++  G
Sbjct:    4 KKYAAEAIGTFWLTFAGCGSAV----IAAGFPQVGIGLVGVSLAFGLSVVTMAYAIG-HISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASG 106          
The following BLAST results are available for this feature:
BLAST of EY756300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
NIP21_ORYSJ3.347e-1129.70Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
AQPM_METTM5.709e-1132.44Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
AQP2_MACPR5.709e-1135.45Aquaporin-2 (Fragment) OS=Macroscelides proboscide... [more]
AQPZ_BRAJA9.739e-1142.59Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-A07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756300 ID=EY756300; Name=EY756300; organism=Citrus sinensis; type=EST; length=899bp
AGATAAAACCTTATCTTCTTCTTCTTAAGAAAGACTCGAGAGAGTTTTTT
TTTCCCTATTCTCTAGCTCTTTCTTGATCAACAATGGCTATTGCCTTCGG
CCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTG
AGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCTCGGCCATT
GCTTTCAACAAGATGACAGCAGATGCAGCACTTGATCCATCAGGGCTAGT
AGCCATCGCTATTTGCCATGGATTTGCTCTATTTGTCGCAGTTGCAATTG
GTGCTAACATCTCAGGTGGCCACGTCAACCCAGCCGTCACCTTTGGATTG
GCTCTTGGTGGCCAAATCACCATCCTCACTGGCATCTTCTACTGGATTGC
CCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTG
GAGGCTTGGCAGTTCCTACCCACAATGTTGCTGCTGGAGTTGGAGCCATT
GAAGGAGTTGTGATGGAGATCATCATCACATTTGGTTTGGTCTACACGGT
CTATGCCACGGCAGCTGACCCCAAGAAGGGATCATTGGGCACCATTGCAC
CCATTGCCATCGGTTTCATTGTCGGTGCCAACATCCCTGGCGCCGGCCCA
TTCTCCGGTGGTTCATGAACCCNGNCCCGTCCTTCGGGCCTGCCGTTGCC
AGCGGCAACTTTCAGGACACTGGATCTACTGGGTTGGCCCTCTCATTGGC
GNTGGCCTTGCCGGGCTCATCTATGGCAATGTGNTCATGCACTCTGAACA
TGCACCCCTATCNTATGACTATTAATTANTAAGTAAACTTTGNTTAAAAG
TTAGTAAATCATTTGATCACTGCTTTTGGCTCTTTCTTTTTGAATAAAA
back to top