EY732176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_HALLT (Probable lipoyl synthase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=lipA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.232e-40 Identity = 76/152 (50.00%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVASQG 770 W+K P G ++ +IK++LRE LHTVCEEA CPN+GECWSG + G TAT M++GD C+RGC FC+V+T NVA+A+A GLDYVV+T VDRDDL D GS HFA+T+R+++ P +L+E L PDF+G+ + + G Sbjct: 10 WLKSRPPSGSRFTEIKERLRERDLHTVCEEANCPNMGECWSGRD-GPGTATFMLMGDRCSRGCNFCDVETG-GMKSLDSDEPENVADAVAEIGLDYVVLTSVDRDDLADGGSEHFAETIREIQRRDPEILVETLIPDFQGDPEAIDRIIDAG 159 HSP 2 Score: 22.3274 bits (46), Expect = 2.232e-40 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 773 NVFAHNLERVEELQ 814 +V AHN+E VE LQ Sbjct: 161 DVIAHNVETVERLQ 174
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_NATPD (Probable lipoyl synthase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=lipA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.754e-39 Identity = 76/148 (51.35%), Postives = 102/148 (68.92%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREV 758 W++ P G ++ +IK+ LR+ L+TVCEEA CPNLG+CWSG + G TAT M+LGD C+RGC FC+V T NVAEA+A GLDYVV+T VDRDDL D G+GHFA+T+R++K ++L+EAL PDF+G+ V + Sbjct: 10 WLRTRPPSGRRFTEIKETLRDRDLNTVCEEANCPNLGDCWSGRD-GPGTATFMLLGDRCSRGCNFCDVATG-GMDPLDPDEPANVAEAVAEIGLDYVVLTSVDRDDLDDGGAGHFAETIREIKRRDTSVLVEALIPDFQGDTDAVDRI 155
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_THET8 (Lipoyl synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=lipA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.308e-38 Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREV 758 W+K +P G +Y +K +REL+LHTVC+EA CPN+GECW+ G T T+MILGD CTR C+FC V T VAEAIA G+ YVV+T VDRDDL D G+ HFA T+R +KE P +L+EAL PDF+G+ V V Sbjct: 42 WIKAPLPTGPRYQALKAMVRELRLHTVCQEALCPNIGECWTHG-----TLTVMILGDICTRACKFCAVHTGNPKGLVDPEEPRRVAEAIARMGVRYVVLTSVDRDDLPDGGASHFAATIRAIKERAPGVLVEALTPDFQGDLKAVETV 184
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_THET2 (Lipoyl synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=lipA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.308e-38 Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREV 758 W+K +P G +Y +K +REL+LHTVC+EA CPN+GECW+ G T T+MILGD CTR C+FC V T VAEAIA G+ YVV+T VDRDDL D G+ HFA T+R +KE P +L+EAL PDF+G+ V V Sbjct: 42 WIKAPLPTGPRYQALKAMVRELRLHTVCQEALCPNIGECWTHG-----TLTVMILGDICTRACKFCAVHTGNPKGLVDPEEPRRVAEAIARMGVRYVVLTSVDRDDLPDGGASHFAATIRAIKERAPGVLVEALTPDFQGDLKAVETV 184
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_SORC5 (Lipoyl synthase OS=Sorangium cellulosum (strain So ce56) GN=lipA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.186e-37 Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVASQG 770 W+K PGGD Y +K+ R+L LHTVCEEA+CPN+GECW G TAT+M+LGD CTRGCRFC V T +VA AIA L YVV+T V+RDDL D G+ H A+TV +L L+P++LIE L DF+G+ V V G Sbjct: 10 WLKVRAPGGDTYHHLKETFRKLDLHTVCEEARCPNVGECWREG-----TATVMLLGDVCTRGCRFCAVTTGDPRGAVDVREPEHVARAIARLSLQYVVMTMVNRDDLLDGGAEHVARTVSRLHALRPDLLIETLVGDFQGHMSAVDMVVDAG 156
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_DEIRA (Lipoyl synthase OS=Deinococcus radiodurans GN=lipA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.200e-36 Identity = 73/152 (48.03%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVASQG 770 W+K +IP G + +++K ++E +LHTVCEEA CPN+GECWS G TAT M++G CTR CRFC V T +VA+++ L YVV+T VDRDDL D G+ HFA+TV+ +KE+ P +EAL PDF GN CV V G Sbjct: 33 WLKVTIPTGQVFTEVRKIVKEHRLHTVCEEAMCPNIGECWSRG-----TATFMLMGHICTRACRFCAVDTGNPMGKLDLDEPRSVADSVRLMDLKYVVLTSVDRDDLPDGGAYHFAKTVKAIKEVNPQTRVEALTPDFGGNTACVDLVLDSG 179
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_DEIGD (Lipoyl synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=lipA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.491e-36 Identity = 75/152 (49.34%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVASQG 770 W+K +IP G Y +++K ++E +LHTVCEEA CPN+GECWS G TAT M++G CTR CRFC V T +VAE++ GL YVV+T VDRDDL D G+ HFA+TV +K P +EAL PDF GN CV V G Sbjct: 30 WLKVTIPTGQVYGEVRKIVKEHRLHTVCEEAMCPNIGECWSRG-----TATFMLMGHICTRACRFCAVDTGNPMGKLDLEEPAHVAESVRLMGLKYVVLTSVDRDDLPDGGAYHFAKTVTAIKRENPGTRVEALTPDFGGNPHCVDLVLESG 176
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_HALHL (Lipoyl synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=lipA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.092e-34 Identity = 72/152 (47.37%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVASQG 770 W+K PGG+ Y ++ + + L TVCEE+ CPNLGECWS G TAT M+LG CTR CRFC+V T + AE++ GL YVV+T VDRDDL D G+ H+AQ VR +K P+ +EAL PDFRG+ VR V G Sbjct: 44 WLKARAPGGEGYRSVRGIVHDHHLSTVCEESHCPNLGECWSHG-----TATFMVLGSVCTRTCRFCSVDTGNPKGRLDPQEPEHCAESVRLMGLRYVVLTSVDRDDLPDGGAEHYAQCVRAIKADNPDTAVEALTPDFRGDEEAVRTVVDSG 190 HSP 2 Score: 21.9422 bits (45), Expect = 2.092e-34 Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 764 SRLNVFAHNLERVEEL 811 S L VFAHN+E V L Sbjct: 189 SGLEVFAHNVEVVRRL 204
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_ANAPZ (Lipoyl synthase OS=Anaplasma phagocytophilum (strain HZ) GN=lipA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.267e-34 Identity = 69/150 (46.00%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVAS 764 W++ +PGG+ + +++ ++ +L+TVCEEA CPN+GECW+ ATIM++GD CTR C FCNVKT V EAI+ GL +VVIT VDRDDL D G+ HFA+ +R++++ PN+ IE L PDF+G G V +AS Sbjct: 7 WLRVKMPGGEVFEEVRDLVKRQRLNTVCEEAACPNIGECWNKRH-----ATIMVMGDVCTRACAFCNVKTG-VPRALDLGEPERVGEAISKLGLKHVVITSVDRDDLPDGGASHFAKCIREIRKRDPNVTIEILTPDFQGKPGAVDVIAS 150
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_PSEMY (Lipoyl synthase OS=Pseudomonas mendocina (strain ymp) GN=lipA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.241e-33 Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVASQG 770 W++ PGG ++ +K+ + E +L TVC+E+ CPN+GECWS G TATIM++G CTR CRFC V T N A+++ L Y+V+T VDRDDL D G+ H+A VR +KE P +++EAL PDF G++ + V G Sbjct: 46 WLRVKAPGGSRFEAVKRNVGEHRLSTVCQESHCPNMGECWSNG-----TATIMLMGSVCTRACRFCAVDTGNPNGWLDLEEPQNTAKSVELMALRYIVLTSVDRDDLEDGGASHYAACVRAIKENTPQVVVEALTPDFDGDHQAIERVVDSG 192 The following BLAST results are available for this feature:
BLAST of EY732176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY732176 ID=EY732176; Name=EY732176; organism=Citrus sinensis; type=EST; length=834bpback to top |