EY732176

Overview
NameEY732176
Unique NameEY732176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_HERAR (Lipoyl synthase OS=Herminiimonas arsenicoxydans GN=lipA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.855e-29
Identity = 68/130 (52.31%), Postives = 85/130 (65.38%), Query Frame = 3
Query:  345 KYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            ++ +IK  LR   L TVCEEA CPN+GEC+     G  TAT MI+GD CTR C FC+V   R           N+A+ IA+  L+YVVIT VDRDDL D G+GHFA+ +R+++EL PN  IE L PDFRG
Sbjct:   58 RFYEIKDILRANNLVTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDVNEPE-NLAKTIAALRLNYVVITSVDRDDLRDGGAGHFAECIRRVRELSPNTRIEILVPDFRG 181          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_BORPE (Lipoyl synthase OS=Bordetella pertussis GN=lipA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.855e-29
Identity = 67/132 (50.76%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  339 GDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            G ++  IK+ LRE  LHTVCEEA CPN+GEC+     G  TAT MI+GD CTR C FC+V   R           N+A  IA+  L YVVIT VDRDDL D G+ HF + + K++E  P+  IE L PDFRG
Sbjct:   61 GSRFYDIKRILREHNLHTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDTQEPE-NLARTIAALKLSYVVITSVDRDDLRDGGAAHFVECIAKVREYSPDTRIEVLVPDFRG 186          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_BORPA (Lipoyl synthase OS=Bordetella parapertussis GN=lipA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.855e-29
Identity = 67/132 (50.76%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  339 GDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            G ++  IK+ LRE  LHTVCEEA CPN+GEC+     G  TAT MI+GD CTR C FC+V   R           N+A  IA+  L YVVIT VDRDDL D G+ HF + + K++E  P+  IE L PDFRG
Sbjct:   61 GSRFYDIKRILREHNLHTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDTQEPE-NLARTIAALKLSYVVITSVDRDDLRDGGAAHFVECIAKVREYSPDTRIEVLVPDFRG 186          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_BORBR (Lipoyl synthase OS=Bordetella bronchiseptica GN=lipA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.855e-29
Identity = 67/132 (50.76%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  339 GDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            G ++  IK+ LRE  LHTVCEEA CPN+GEC+     G  TAT MI+GD CTR C FC+V   R           N+A  IA+  L YVVIT VDRDDL D G+ HF + + K++E  P+  IE L PDFRG
Sbjct:   61 GSRFYDIKRILREHNLHTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDTQEPE-NLARTIAALKLSYVVITSVDRDDLRDGGAAHFVECIAKVREYSPDTRIEVLVPDFRG 186          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_XANP2 (Lipoyl synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lipA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 66/150 (44.00%), Postives = 86/150 (57.33%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVAS 764
            W++   PG   + Q  + +R   LHTVCEEA CPN+GECW         AT MI+GDTCTR C FCNV+T              V +A+A  GL +VVIT VDRDDL D G+ HFA+T+  +++  P   IE L PDF   +G +  V +
Sbjct:   30 WIRVKAPGSAGWSQTAEIVRANGLHTVCEEAGCPNIGECWEKKH-----ATFMIMGDTCTRACAFCNVRTGMPEALDQGEPQ-KVGDAVAKLGLSHVVITSVDRDDLADGGAEHFARTIAAIRKASPGTTIEILTPDFLRKDGALEVVVA 173          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_AZOC5 (Lipoyl synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lipA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 67/150 (44.67%), Postives = 84/150 (56.00%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVAS 764
            W++   PG   +      +R   LHTVCEEA CPN+GECW         AT MI+GDTCTR C FCNV+T              V EA+A  GL +VVIT VDRDDL D G+ HFA+T+  +++L P   IE L PDF    G +  V +
Sbjct:   30 WIRVKAPGSAGWSNTAGIVRANGLHTVCEEAGCPNIGECWEKKH-----ATFMIMGDTCTRACSFCNVRTGMPKALDLDEPQ-KVGEAVAKLGLSHVVITSVDRDDLTDGGAEHFARTIASIRKLSPGTTIEILTPDFLRKPGAIEVVVA 173          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_THIDA (Lipoyl synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=lipA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.164e-29
Identity = 70/140 (50.00%), Postives = 83/140 (59.29%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W++   P      ++K  LRE KLHTVCEEA CPNLGEC+  G     TAT MILGD CTR C FC+V               ++AE IA   L YVVIT VDRDDL D G+GHFA+ +  ++E  P   IE L PDFRG
Sbjct:   31 WIRAKAPSLPNVGRLKGILREAKLHTVCEEASCPNLGECFGHG-----TATFMILGDLCTRRCPFCDVGHG-TPLPPDADEPRHLAETIALMALKYVVITSVDRDDLRDGGAGHFAECIAAVREKSPATRIEILTPDFRG 164          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_PHOPR (Lipoyl synthase OS=Photobacterium profundum GN=lipA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.164e-29
Identity = 70/141 (49.65%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            WMK  +P   K +Q IK  LR+ KLH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R          +++A+ IA   L YVVIT VDRDDL D G+ HF   +R+++E  P + IE L PDFRG
Sbjct:   41 WMKIKLPSDSKRIQEIKSALRKNKLHSVCEEASCPNLAECFNHG-----TATFMILGAICTRRCPFCDVAHGRPLPPNAEEP-SHLAQTIADMKLKYVVITSVDRDDLRDGGAQHFVDCIREIREKSPEIHIETLVPDFRG 175          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_METNO (Lipoyl synthase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=lipA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.164e-29
Identity = 66/150 (44.00%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVAS 764
            W++   PG   + +  + +RE  L TVCEEA CPN+GECW         AT MI+GDTCTR C FCNV+T              VA+A+A  GL +VVIT VDRDDL D G+GHFA  +  +++  P   IE L PDF    G +  V +
Sbjct:   33 WIRVRAPGSPGWAETNRIVREHGLVTVCEEAGCPNIGECWEKKH-----ATFMIMGDTCTRACAFCNVRTG-LPQGLDGDEPARVADAVARLGLSHVVITSVDRDDLRDGGAGHFAAVIGAIRQASPGTTIEVLTPDFLRKEGALDVVVA 176          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_DESRM (Lipoyl synthase OS=Desulfotomaculum reducens (strain MI-1) GN=lipA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.164e-29
Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGN 737
            W+K  + G +K  ++K  L+ L LHTVCEEA CPNL EC+     G  TAT MILG  CTR C FCNV T            +NVA+A+   GL +VVIT V RDDL D G+GHFA+ + KL+  +  +++E L PDF+G+
Sbjct:    8 WLKIKLQGAEKSHEVKDMLKRLSLHTVCEEANCPNLIECF-----GRKTATFMILGSVCTRNCTFCNV-TKGLTQAVDAEEPSNVAQAVKELGLKHVVITSVTRDDLPDGGAGHFAKVIEKLRPTE--VIVEVLIPDFQGD 140          
The following BLAST results are available for this feature:
BLAST of EY732176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LIPA_HERAR1.855e-2952.31Lipoyl synthase OS=Herminiimonas arsenicoxydans GN... [more]
LIPA_BORPE1.855e-2950.76Lipoyl synthase OS=Bordetella pertussis GN=lipA PE... [more]
LIPA_BORPA1.855e-2950.76Lipoyl synthase OS=Bordetella parapertussis GN=lip... [more]
LIPA_BORBR1.855e-2950.76Lipoyl synthase OS=Bordetella bronchiseptica GN=li... [more]
LIPA_XANP22.423e-2944.00Lipoyl synthase OS=Xanthobacter autotrophicus (str... [more]
LIPA_AZOC52.423e-2944.67Lipoyl synthase OS=Azorhizobium caulinodans (strai... [more]
LIPA_THIDA3.164e-2950.00Lipoyl synthase OS=Thiobacillus denitrificans (str... [more]
LIPA_PHOPR3.164e-2949.65Lipoyl synthase OS=Photobacterium profundum GN=lip... [more]
LIPA_METNO3.164e-2944.00Lipoyl synthase OS=Methylobacterium nodulans (stra... [more]
LIPA_DESRM3.164e-2947.52Lipoyl synthase OS=Desulfotomaculum reducens (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-056-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732176 ID=EY732176; Name=EY732176; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGCACAATCTCTAATTTTCTCTCTCTAAAGCTTCCCAGCCA
CCAGAGAGAGAAAAAAAATCGGCCATGCGATCGCGGTTCACATTAGCCCT
AGCTCGCACTTTAACAAGCAGAACGAGACCGTTTTCATCGTCAGCACAAA
CCCCACCAACCGAACGGCCCACCAAATTCCCCCAAACTCTCGCGGGCCTC
CGTGCCCGCCTGGCCTCCGAGTCACCCGCCCTCTCCGATTTCATCGACCT
CCAAAGCAACAGTTCGTACTCCGTCGAAGTTGGAACCAAAAAGAAGCCCC
TTCCCAAGCCCAAATGGATGAAGGAATCGATCCCCGGCGGCGATAAATAC
GTTCAGATTAAGAAAAAATTGCGCGAGTTGAAGCTTCACACTGTTTGTGA
AGAGGCCAAGTGCCCAAATTTGGGGGAGTGTTGGTCTGGCGGCGAGACGG
GCACTGCAACGGCCACAATTATGATCTTGGGCGATACCTGTACTCGCGGT
TGCAGGTTTTGCAATGTGAAGACGTCGCGTGCACCTCCACCACCTGACCC
AGACGAGCCTACTAATGTTGCTGAGGCAATTGCGTCCTGNGGTTTGGATT
ATGTGGTGATTACTANTGTTGATAGAGATGATTTANCTGATCAGGGAAGT
GGGCATTTTGCTCAGACGGTGCGGAAGTTGAAAGAATTGAAGCCGAATAT
GCTTATTGAAGCATTGGGTCCTGATTTTCGCGGGAACAACGGGTGTGTCC
GGGAAGTTGCCAGTCAAGGTTGAATGTCTTTGCTCATAATTTGGAAAGGG
TGGAAGAGCTTCAAGTGGGGTGAGGGGATACGTT
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