EY732176

Overview
NameEY732176
Unique NameEY732176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_NITMU (Lipoyl synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=lipA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.398e-29
Identity = 66/140 (47.14%), Postives = 86/140 (61.43%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W++       ++ ++K+ LRE KLHTVCEEA CPN+GEC+     G  TAT MILGD CTR C FC+V   R           ++A++IA+  L YVVIT VDRDDL D G+ HF   +R+++   P   IE L PDFRG
Sbjct:   34 WIRVRSSNSQEFYEVKRILREQKLHTVCEEASCPNIGECF-----GKGTATFMILGDLCTRRCPFCDVAHGRPRPPDPEEPL-HLAQSIAAMKLKYVVITSVDRDDLRDGGAQHFVDCIREVRAHSPQTKIEILVPDFRG 167          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_GRABC (Lipoyl synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=lipA PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.398e-29
Identity = 68/149 (45.64%), Postives = 84/149 (56.38%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVA 761
            W++   P    Y Q +  +RE +L TVCEEA CPN+GECWS        AT+MI+GDTCTR C FCNVKT              VA+A+A  GL +VVIT VDRDDL D G+ H A  ++ ++   P   IE L PDF    G    VA
Sbjct:   38 WIRVKAPNHPVYHQTQALMRENRLTTVCEEAACPNIGECWSQRH-----ATMMIMGDTCTRACSFCNVKTG-LPHALDGDEPARVADAVARLGLRHVVITSVDRDDLNDGGAAHIAAVIKAVRLAAPETTIEVLTPDFLRKPGAAETVA 180          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_EHRRW (Lipoyl synthase OS=Ehrlichia ruminantium (strain Welgevonden) GN=lipA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.398e-29
Identity = 62/149 (41.61%), Postives = 92/149 (61.74%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVA 761
            W+K  +P G  + +++  ++  KL+TVCEEA CPN+GECW+        AT+MILG TCTR C FCNV  S            ++A+A++S  L +VVIT VDRDDL D G+GHF + + ++++   N+ IE L PDF   +  + ++A
Sbjct:    7 WLKVKMPTGSAFYEMRNLMKLHKLNTVCEEAACPNIGECWNKKH-----ATVMILGSTCTRACAFCNV-ASGIPDKLDPHEPQSLAKAVSSLKLQHVVITSVDRDDLEDGGAGHFVECIEEIRKRDSNVTIEILTPDFLNKHDAIDKIA 149          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_EHRRG (Lipoyl synthase OS=Ehrlichia ruminantium (strain Gardel) GN=lipA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.398e-29
Identity = 62/149 (41.61%), Postives = 92/149 (61.74%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVA 761
            W+K  +P G  + +++  ++  KL+TVCEEA CPN+GECW+        AT+MILG TCTR C FCNV  S            ++A+A++S  L +VVIT VDRDDL D G+GHF + + ++++   N+ IE L PDF   +  + ++A
Sbjct:    7 WLKVKMPTGSAFYEMRNLMKLHKLNTVCEEAACPNIGECWNKKH-----ATVMILGSTCTRACAFCNV-ASGIPDKLDPHEPQSLAKAVSSLKLQHVVITSVDRDDLEDGGAGHFVECIEEIRKRDSNVTIEILTPDFLNKHDAIDKIA 149          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_BURMS (Lipoyl synthase OS=Burkholderia mallei (strain SAVP1) GN=lipA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.398e-29
Identity = 68/141 (48.23%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  315 WMK-ESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W++ ++     ++ +IK  LRE  LHTVCEEA CPN+GEC+     G  TAT MI+GD CTR C FC+V   R           N+A  IA+  L YVVIT VDRDDL D G+GHF + +R+++E  P   IE L PDFRG
Sbjct:   48 WIRVKAATSSSRFNEIKTILREHNLHTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPK-NLARTIAALKLKYVVITSVDRDDLRDGGAGHFVECIREVREQSPATRIEILTPDFRG 182          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_BURMA (Lipoyl synthase OS=Burkholderia mallei GN=lipA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.398e-29
Identity = 68/141 (48.23%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  315 WMK-ESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W++ ++     ++ +IK  LRE  LHTVCEEA CPN+GEC+     G  TAT MI+GD CTR C FC+V   R           N+A  IA+  L YVVIT VDRDDL D G+GHF + +R+++E  P   IE L PDFRG
Sbjct:   48 WIRVKAATSSSRFNEIKTILREHNLHTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPK-NLARTIAALKLKYVVITSVDRDDLRDGGAGHFVECIREVREQSPATRIEILTPDFRG 182          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_BURM9 (Lipoyl synthase OS=Burkholderia mallei (strain NCTC 10229) GN=lipA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.398e-29
Identity = 68/141 (48.23%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  315 WMK-ESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W++ ++     ++ +IK  LRE  LHTVCEEA CPN+GEC+     G  TAT MI+GD CTR C FC+V   R           N+A  IA+  L YVVIT VDRDDL D G+GHF + +R+++E  P   IE L PDFRG
Sbjct:   48 WIRVKAATSSSRFNEIKTILREHNLHTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPK-NLARTIAALKLKYVVITSVDRDDLRDGGAGHFVECIREVREQSPATRIEILTPDFRG 182          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_BURM7 (Lipoyl synthase OS=Burkholderia mallei (strain NCTC 10247) GN=lipA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.398e-29
Identity = 68/141 (48.23%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  315 WMK-ESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W++ ++     ++ +IK  LRE  LHTVCEEA CPN+GEC+     G  TAT MI+GD CTR C FC+V   R           N+A  IA+  L YVVIT VDRDDL D G+GHF + +R+++E  P   IE L PDFRG
Sbjct:   48 WIRVKAATSSSRFNEIKTILREHNLHTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPK-NLARTIAALKLKYVVITSVDRDDLRDGGAGHFVECIREVREQSPATRIEILTPDFRG 182          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_VARPS (Lipoyl synthase OS=Variovorax paradoxus (strain S110) GN=lipA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.050e-29
Identity = 68/138 (49.28%), Postives = 83/138 (60.14%), Query Frame = 3
Query:  345 KYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREV 758
            ++ +IK+ LRE  LHTVCEEA CPN+GEC+  G     TAT MI+GD CTR C FC+V   R           N+A+ IA   L YVVIT VDRDDL D GS HF   +  ++EL P   IE L PDFRG +    E+
Sbjct:   58 RFYEIKQILRESNLHTVCEEASCPNIGECFGNG-----TATFMIMGDKCTRRCPFCDVGHGRPDPLDKDEPL-NLAKTIAKLRLKYVVITSVDRDDLRDGGSQHFVDCITNIRELSPMTQIEILVPDFRGRDDRALEI 189          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_RHOPT (Lipoyl synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=lipA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.050e-29
Identity = 68/150 (45.33%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVAS 764
            W++   P    Y + +  ++E  LHTVCEEA CPN+GECW         AT MI+GDTCTR C FCNVKT              VAEA    GL ++VIT VDRDDL D G+ HFA T+R ++E  P   IE L PDF   +G +  V +
Sbjct:   34 WIRVRAPTTRGYGETRGIVKENGLHTVCEEAGCPNIGECWDKKH-----ATFMIMGDTCTRACAFCNVKTGMPGALDANEP-AYVAEATRKLGLQHLVITSVDRDDLADGGAAHFAATIRAVREACPTTTIEILTPDFLRKDGALEVVVA 177          
The following BLAST results are available for this feature:
BLAST of EY732176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LIPA_NITMU5.398e-2947.14Lipoyl synthase OS=Nitrosospira multiformis (strai... [more]
LIPA_GRABC5.398e-2945.64Lipoyl synthase OS=Granulibacter bethesdensis (str... [more]
LIPA_EHRRW5.398e-2941.61Lipoyl synthase OS=Ehrlichia ruminantium (strain W... [more]
LIPA_EHRRG5.398e-2941.61Lipoyl synthase OS=Ehrlichia ruminantium (strain G... [more]
LIPA_BURMS5.398e-2948.23Lipoyl synthase OS=Burkholderia mallei (strain SAV... [more]
LIPA_BURMA5.398e-2948.23Lipoyl synthase OS=Burkholderia mallei GN=lipA PE=... [more]
LIPA_BURM95.398e-2948.23Lipoyl synthase OS=Burkholderia mallei (strain NCT... [more]
LIPA_BURM75.398e-2948.23Lipoyl synthase OS=Burkholderia mallei (strain NCT... [more]
LIPA_VARPS7.050e-2949.28Lipoyl synthase OS=Variovorax paradoxus (strain S1... [more]
LIPA_RHOPT7.050e-2945.33Lipoyl synthase OS=Rhodopseudomonas palustris (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-056-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732176 ID=EY732176; Name=EY732176; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGCACAATCTCTAATTTTCTCTCTCTAAAGCTTCCCAGCCA
CCAGAGAGAGAAAAAAAATCGGCCATGCGATCGCGGTTCACATTAGCCCT
AGCTCGCACTTTAACAAGCAGAACGAGACCGTTTTCATCGTCAGCACAAA
CCCCACCAACCGAACGGCCCACCAAATTCCCCCAAACTCTCGCGGGCCTC
CGTGCCCGCCTGGCCTCCGAGTCACCCGCCCTCTCCGATTTCATCGACCT
CCAAAGCAACAGTTCGTACTCCGTCGAAGTTGGAACCAAAAAGAAGCCCC
TTCCCAAGCCCAAATGGATGAAGGAATCGATCCCCGGCGGCGATAAATAC
GTTCAGATTAAGAAAAAATTGCGCGAGTTGAAGCTTCACACTGTTTGTGA
AGAGGCCAAGTGCCCAAATTTGGGGGAGTGTTGGTCTGGCGGCGAGACGG
GCACTGCAACGGCCACAATTATGATCTTGGGCGATACCTGTACTCGCGGT
TGCAGGTTTTGCAATGTGAAGACGTCGCGTGCACCTCCACCACCTGACCC
AGACGAGCCTACTAATGTTGCTGAGGCAATTGCGTCCTGNGGTTTGGATT
ATGTGGTGATTACTANTGTTGATAGAGATGATTTANCTGATCAGGGAAGT
GGGCATTTTGCTCAGACGGTGCGGAAGTTGAAAGAATTGAAGCCGAATAT
GCTTATTGAAGCATTGGGTCCTGATTTTCGCGGGAACAACGGGTGTGTCC
GGGAAGTTGCCAGTCAAGGTTGAATGTCTTTGCTCATAATTTGGAAAGGG
TGGAAGAGCTTCAAGTGGGGTGAGGGGATACGTT
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