EY732176

Overview
NameEY732176
Unique NameEY732176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_RICBR (Lipoyl synthase OS=Rickettsia bellii (strain RML369-C) GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 70/150 (46.67%), Postives = 90/150 (60.00%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVAS 764
            W+K   P   +Y   K  ++ LKL+TVCEEA CPN+GECWS        AT+MILG  CTR CRFCNVKT R            +AEA+   GL +VVIT VDRDDL D G+ HFA+ + ++++  PN  IE L PDF   +G    +A+
Sbjct:   59 WIKVKAPNSSEYYNTKDLIKNLKLNTVCEEAACPNIGECWSKKH-----ATVMILGSVCTRACRFCNVKTGRPDLLDPHEPQ-RLAEAVQKLGLKHVVITSVDRDDLEDGGATHFAECISEIRKSSPNTTIEILTPDFLRKDGAAEIIAN 202          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_RICB8 (Lipoyl synthase OS=Rickettsia bellii (strain OSU 85-389) GN=lipA PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 70/150 (46.67%), Postives = 90/150 (60.00%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVAS 764
            W+K   P   +Y   K  ++ LKL+TVCEEA CPN+GECWS        AT+MILG  CTR CRFCNVKT R            +AEA+   GL +VVIT VDRDDL D G+ HFA+ + ++++  PN  IE L PDF   +G    +A+
Sbjct:    7 WIKVKAPNSSEYYNTKDLIKNLKLNTVCEEAACPNIGECWSKKH-----ATVMILGSVCTRACRFCNVKTGRPDLLDPHEPQ-RLAEAVQKLGLKHVVITSVDRDDLEDGGATHFAECISEIRKSSPNTTIEILTPDFLRKDGAAEIIAN 150          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_FRATW (Lipoyl synthase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNN 740
            W+K       +Y+++K   ++ KL TVCEEA+CPN+ ECWS G     TATIM++G  CTR C+FC+V T             N AE++   GL+YVV+T VDRDDL D G+GH+A T+  +K L  N+ +EAL PDF G N
Sbjct:   45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGIN 181          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_FRATT (Lipoyl synthase OS=Francisella tularensis subsp. tularensis GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNN 740
            W+K       +Y+++K   ++ KL TVCEEA+CPN+ ECWS G     TATIM++G  CTR C+FC+V T             N AE++   GL+YVV+T VDRDDL D G+GH+A T+  +K L  N+ +EAL PDF G N
Sbjct:   45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGIN 181          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_FRATO (Lipoyl synthase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNN 740
            W+K       +Y+++K   ++ KL TVCEEA+CPN+ ECWS G     TATIM++G  CTR C+FC+V T             N AE++   GL+YVV+T VDRDDL D G+GH+A T+  +K L  N+ +EAL PDF G N
Sbjct:   45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGIN 181          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_FRATN (Lipoyl synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNN 740
            W+K       +Y+++K   ++ KL TVCEEA+CPN+ ECWS G     TATIM++G  CTR C+FC+V T             N AE++   GL+YVV+T VDRDDL D G+GH+A T+  +K L  N+ +EAL PDF G N
Sbjct:   45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGIN 181          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_FRATM (Lipoyl synthase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNN 740
            W+K       +Y+++K   ++ KL TVCEEA+CPN+ ECWS G     TATIM++G  CTR C+FC+V T             N AE++   GL+YVV+T VDRDDL D G+GH+A T+  +K L  N+ +EAL PDF G N
Sbjct:   45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGIN 181          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_FRATH (Lipoyl synthase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNN 740
            W+K       +Y+++K   ++ KL TVCEEA+CPN+ ECWS G     TATIM++G  CTR C+FC+V T             N AE++   GL+YVV+T VDRDDL D G+GH+A T+  +K L  N+ +EAL PDF G N
Sbjct:   45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGIN 181          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_FRATF (Lipoyl synthase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNN 740
            W+K       +Y+++K   ++ KL TVCEEA+CPN+ ECWS G     TATIM++G  CTR C+FC+V T             N AE++   GL+YVV+T VDRDDL D G+GH+A T+  +K L  N+ +EAL PDF G N
Sbjct:   45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGIN 181          
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_FRAT1 (Lipoyl synthase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=lipA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.051e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNN 740
            W+K       +Y+++K   ++ KL TVCEEA+CPN+ ECWS G     TATIM++G  CTR C+FC+V T             N AE++   GL+YVV+T VDRDDL D G+GH+A T+  +K L  N+ +EAL PDF G N
Sbjct:   45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGIN 181          
The following BLAST results are available for this feature:
BLAST of EY732176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LIPA_RICBR1.051e-3246.67Lipoyl synthase OS=Rickettsia bellii (strain RML36... [more]
LIPA_RICB81.051e-3246.67Lipoyl synthase OS=Rickettsia bellii (strain OSU 8... [more]
LIPA_FRATW1.051e-3246.48Lipoyl synthase OS=Francisella tularensis subsp. t... [more]
LIPA_FRATT1.051e-3246.48Lipoyl synthase OS=Francisella tularensis subsp. t... [more]
LIPA_FRATO1.051e-3246.48Lipoyl synthase OS=Francisella tularensis subsp. h... [more]
LIPA_FRATN1.051e-3246.48Lipoyl synthase OS=Francisella tularensis subsp. n... [more]
LIPA_FRATM1.051e-3246.48Lipoyl synthase OS=Francisella tularensis subsp. m... [more]
LIPA_FRATH1.051e-3246.48Lipoyl synthase OS=Francisella tularensis subsp. h... [more]
LIPA_FRATF1.051e-3246.48Lipoyl synthase OS=Francisella tularensis subsp. h... [more]
LIPA_FRAT11.051e-3246.48Lipoyl synthase OS=Francisella tularensis subsp. t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-056-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732176 ID=EY732176; Name=EY732176; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGCACAATCTCTAATTTTCTCTCTCTAAAGCTTCCCAGCCA
CCAGAGAGAGAAAAAAAATCGGCCATGCGATCGCGGTTCACATTAGCCCT
AGCTCGCACTTTAACAAGCAGAACGAGACCGTTTTCATCGTCAGCACAAA
CCCCACCAACCGAACGGCCCACCAAATTCCCCCAAACTCTCGCGGGCCTC
CGTGCCCGCCTGGCCTCCGAGTCACCCGCCCTCTCCGATTTCATCGACCT
CCAAAGCAACAGTTCGTACTCCGTCGAAGTTGGAACCAAAAAGAAGCCCC
TTCCCAAGCCCAAATGGATGAAGGAATCGATCCCCGGCGGCGATAAATAC
GTTCAGATTAAGAAAAAATTGCGCGAGTTGAAGCTTCACACTGTTTGTGA
AGAGGCCAAGTGCCCAAATTTGGGGGAGTGTTGGTCTGGCGGCGAGACGG
GCACTGCAACGGCCACAATTATGATCTTGGGCGATACCTGTACTCGCGGT
TGCAGGTTTTGCAATGTGAAGACGTCGCGTGCACCTCCACCACCTGACCC
AGACGAGCCTACTAATGTTGCTGAGGCAATTGCGTCCTGNGGTTTGGATT
ATGTGGTGATTACTANTGTTGATAGAGATGATTTANCTGATCAGGGAAGT
GGGCATTTTGCTCAGACGGTGCGGAAGTTGAAAGAATTGAAGCCGAATAT
GCTTATTGAAGCATTGGGTCCTGATTTTCGCGGGAACAACGGGTGTGTCC
GGGAAGTTGCCAGTCAAGGTTGAATGTCTTTGCTCATAATTTGGAAAGGG
TGGAAGAGCTTCAAGTGGGGTGAGGGGATACGTT
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