EY732176

Overview
NameEY732176
Unique NameEY732176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_BARHE (Lipoyl synthase OS=Bartonella henselae GN=lipA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.295e-26
Identity = 64/150 (42.67%), Postives = 82/150 (54.67%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRGNNGCVREVAS 764
            W++   P    Y +    +R  KL TVCEEA CPN+GECWS        A+ MILG+ CTR C FCNV T              VA+A+A   L +VVIT VDRDDL D G+ HFA+ +  ++   P   IE L PDFR  +G +  V +
Sbjct:   32 WIRVKAPTSQVYKETHGIVRAHKLVTVCEEAGCPNIGECWSQRH-----ASFMILGEICTRACAFCNVATG-IPFAVDENEPERVADAVARMELKHVVITSVDRDDLADGGAEHFAKVIYAIRRKAPKTTIEVLTPDFRHKDGALEIVVA 175
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERPY (Lipoyl synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERPS (Lipoyl synthase OS=Yersinia pseudotuberculosis GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERPP (Lipoyl synthase OS=Yersinia pestis (strain Pestoides F) GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERPN (Lipoyl synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERPG (Lipoyl synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERPE (Lipoyl synthase OS=Yersinia pestis GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERPB (Lipoyl synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERPA (Lipoyl synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
[Close]
BLAST of EY732176 vs. ExPASy Swiss-Prot
Match: LIPA_YERP3 (Lipoyl synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lipA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  315 WMKESIPGGDKYVQ-IKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASXGLDYVVITXVDRDDLXDQGSGHFAQTVRKLKELKPNMLIEALGPDFRG 734
            W+K  +P     +Q IK  +R+  LH+VCEEA CPNL EC++ G     TAT MILG  CTR C FC+V   R            +A+ I   GL YVVIT VDRDDL D G+ HFA  +  ++   P + IE L PDFRG
Sbjct:   40 WLKIKLPTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHG-----TATFMILGAICTRRCPFCDVAHGRPVTPDANEPE-KLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTIKIETLVPDFRG 174
The following BLAST results are available for this feature:
BLAST of EY732176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LIPA_BARHE7.295e-2642.67Lipoyl synthase OS=Bartonella henselae GN=lipA PE=... [more]
LIPA_YERPY9.528e-2646.10Lipoyl synthase OS=Yersinia pseudotuberculosis ser... [more]
LIPA_YERPS9.528e-2646.10Lipoyl synthase OS=Yersinia pseudotuberculosis GN=... [more]
LIPA_YERPP9.528e-2646.10Lipoyl synthase OS=Yersinia pestis (strain Pestoid... [more]
LIPA_YERPN9.528e-2646.10Lipoyl synthase OS=Yersinia pestis bv. Antiqua (st... [more]
LIPA_YERPG9.528e-2646.10Lipoyl synthase OS=Yersinia pestis bv. Antiqua (st... [more]
LIPA_YERPE9.528e-2646.10Lipoyl synthase OS=Yersinia pestis GN=lipA PE=3 SV... [more]
LIPA_YERPB9.528e-2646.10Lipoyl synthase OS=Yersinia pseudotuberculosis ser... [more]
LIPA_YERPA9.528e-2646.10Lipoyl synthase OS=Yersinia pestis bv. Antiqua (st... [more]
LIPA_YERP39.528e-2646.10Lipoyl synthase OS=Yersinia pseudotuberculosis ser... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-056-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732176 ID=EY732176; Name=EY732176; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGCACAATCTCTAATTTTCTCTCTCTAAAGCTTCCCAGCCA
CCAGAGAGAGAAAAAAAATCGGCCATGCGATCGCGGTTCACATTAGCCCT
AGCTCGCACTTTAACAAGCAGAACGAGACCGTTTTCATCGTCAGCACAAA
CCCCACCAACCGAACGGCCCACCAAATTCCCCCAAACTCTCGCGGGCCTC
CGTGCCCGCCTGGCCTCCGAGTCACCCGCCCTCTCCGATTTCATCGACCT
CCAAAGCAACAGTTCGTACTCCGTCGAAGTTGGAACCAAAAAGAAGCCCC
TTCCCAAGCCCAAATGGATGAAGGAATCGATCCCCGGCGGCGATAAATAC
GTTCAGATTAAGAAAAAATTGCGCGAGTTGAAGCTTCACACTGTTTGTGA
AGAGGCCAAGTGCCCAAATTTGGGGGAGTGTTGGTCTGGCGGCGAGACGG
GCACTGCAACGGCCACAATTATGATCTTGGGCGATACCTGTACTCGCGGT
TGCAGGTTTTGCAATGTGAAGACGTCGCGTGCACCTCCACCACCTGACCC
AGACGAGCCTACTAATGTTGCTGAGGCAATTGCGTCCTGNGGTTTGGATT
ATGTGGTGATTACTANTGTTGATAGAGATGATTTANCTGATCAGGGAAGT
GGGCATTTTGCTCAGACGGTGCGGAAGTTGAAAGAATTGAAGCCGAATAT
GCTTATTGAAGCATTGGGTCCTGATTTTCGCGGGAACAACGGGTGTGTCC
GGGAAGTTGCCAGTCAAGGTTGAATGTCTTTGCTCATAATTTGGAAAGGG
TGGAAGAGCTTCAAGTGGGGTGAGGGGATACGTT
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