EY756285

Overview
NameEY756285
Unique NameEY756285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  235 VTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  235 VTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  234 VTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  235 VTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  237 VTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  234 VTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  196 VTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPG 107
            VTGKGP+ENL DHIADPV NNAWAYATNFVPG
Sbjct:  230 VTGKGPLENLADHIADPVNNNAWAYATNFVPG 261          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.649e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  235 VTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267          
BLAST of EY756285 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.649e-11
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3
Query:   12 VTGKGPIENLYDHIADPVANNAWAYATNFVPGK 110
            VTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  233 VTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265          
The following BLAST results are available for this feature:
BLAST of EY756285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CB25_TOBAC4.325e-1184.85Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB25_PETSP4.325e-1184.85Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB25_NICPL4.325e-1184.85Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB23_PETSP4.325e-1184.85Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB22_PEA4.325e-1184.85Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB21_TOBAC4.325e-1184.85Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB21_PEA4.325e-1184.85Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB21_MAIZE4.325e-1190.63Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB2G_SOLLC5.649e-1184.85Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB2C_SOLLC5.649e-1184.85Chlorophyll a-b binding protein 1C, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-G12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756285 ID=EY756285; Name=EY756285; organism=Citrus sinensis; type=EST; length=288bp
CCACGCGTCCGGTCACTGGGAAGGGTCCAATTGAGAACCTCTACGACCAC
ATTGCTGATCCTGTGGCCAACAATGCCTGGGCTTATGCCACTAACTTTGT
TCCCGGAAAGTGAAGAAACTCATGACTTGATGGTGTCTGTTTCATCTGTA
ACATTATTCTATCTATCGTATGTGCTTTTGTGGAAAACTCTGTCATGGAC
TTACTAGTAGCTCTGTAATGTTACCATTAGAAATGCTATGCTCCTGATCT
TTTATTTCCNNAAAAAAAAAAAAAAAAAAAAAAAAAAA
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