EY756279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_GEOKA (30S ribosomal protein S5 OS=Geobacillus kaustophilus GN=rpsE PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 24 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 455 +L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P +V G G+ + + PA G G++A + VL+ AGI D+ + S GS + N V+ATF+ L Sbjct: 10 ELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVRATFDGL 144
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_BACST (30S ribosomal protein S5 OS=Bacillus stearothermophilus GN=rpsE PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 24 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 455 +L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P +V G G+ + + PA G G++A + VL+ AGI D+ + S GS + N V+ATF+ L Sbjct: 10 ELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVRATFDGL 144
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_UREU1 (30S ribosomal protein S5 OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.785e-17 Identity = 55/151 (36.42%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 30 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTP 482 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ + N ++AT LL+ LTP Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATINGLLQQ---LTP 189
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_UREPA (30S ribosomal protein S5 OS=Ureaplasma parvum GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.785e-17 Identity = 55/151 (36.42%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 30 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTP 482 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ + N ++AT LL+ LTP Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATINGLLQQ---LTP 189
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_UREP2 (30S ribosomal protein S5 OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.785e-17 Identity = 55/151 (36.42%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 30 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTP 482 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ + N ++AT LL+ LTP Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATINGLLQQ---LTP 189
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_GEOTN (30S ribosomal protein S5 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 24 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 455 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK +++ V +G T+P +V G G+ + + PA G G++A + VL+ AGI D+ + S GS + N V+ATF+ L Sbjct: 10 ELEERVVAINRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLMEV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVRATFDGL 144
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_FLAPJ (30S ribosomal protein S5 OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.734e-16 Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 24 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLK 461 +LKD ++ + V K T+ G+ F A VVVGD +G VG G+ SK+V+ AI A+ AK +++ + +VP + GK G V ++PA G G++A + VL+ GI DV + S+GS+ N VKATF+ LL+ Sbjct: 17 ELKDRLVSVNRVTKVTKGGRAFGFSAIVVVGDENGVVGHGLGKSKDVSEAIAKAVEDAKKNLVKIPLS--------GKSVPHEQKGKFGGARVNLMPASHGTGVIAGGAVRSVLESVGIHDVLSKSQGSSNP-HNVVKATFDALLQ 153
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_CLOPS (30S ribosomal protein S5 OS=Clostridium perfringens (strain SM101 / Type A) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 27 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 455 LK++V+ I V K + G+ RF A VVVGD +GHVG+G S E+ AIR I AK +++ V + +G TVP ++ GK G+ V ++PA G G++A + VL+ AG+ DV S GS N VKAT L Sbjct: 10 LKEKVVSISRVTKVVKGGRNFRFSALVVVGDENGHVGVGTGKSIEIPEAIRKGIEDAKKNLVEV------SIVGT--TVPHEIHGKFGTGDVLIMPATEGTGVIAGGPARSVLELAGLKDVRAKSLGSNNP-RNMVKATINGL 143
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_CLOPE (30S ribosomal protein S5 OS=Clostridium perfringens GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 27 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 455 LK++V+ I V K + G+ RF A VVVGD +GHVG+G S E+ AIR I AK +++ V + +G TVP ++ GK G+ V ++PA G G++A + VL+ AG+ DV S GS N VKAT L Sbjct: 10 LKEKVVSISRVTKVVKGGRNFRFSALVVVGDENGHVGVGTGKSIEIPEAIRKGIEDAKKNLVEV------SIVGT--TVPHEIHGKFGTGDVLIMPATEGTGVIAGGPARSVLELAGLKDVRAKSLGSNNP-RNMVKATINGL 143
BLAST of EY756279 vs. ExPASy Swiss-Prot
Match: RS5_CLOP1 (30S ribosomal protein S5 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 27 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 455 LK++V+ I V K + G+ RF A VVVGD +GHVG+G S E+ AIR I AK +++ V + +G TVP ++ GK G+ V ++PA G G++A + VL+ AG+ DV S GS N VKAT L Sbjct: 10 LKEKVVSISRVTKVVKGGRNFRFSALVVVGDENGHVGVGTGKSIEIPEAIRKGIEDAKKNLVEV------SIVGT--TVPHEIHGKFGTGDVLIMPATEGTGVIAGGPARSVLELAGLKDVRAKSLGSNNP-RNMVKATINGL 143 The following BLAST results are available for this feature:
BLAST of EY756279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756279 ID=EY756279; Name=EY756279; organism=Citrus sinensis; type=EST; length=816bpback to top |