EY756263

Overview
NameEY756263
Unique NameEY756263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756263 vs. ExPASy Swiss-Prot
Match: CTR2_MOUSE (Low affinity cationic amino acid transporter 2 OS=Mus musculus GN=Slc7a2 PE=1 SV=2)

HSP 1 Score: 51.6026 bits (122), Expect = 1.761e-12
Identity = 40/115 (34.78%), Postives = 55/115 (47.83%), Query Frame = 3
Query:  312 FLIAGIASAFSAFCYAELASRWPSAGSAYHYSYICVGEGVRWLIG*L*YLSTQLAGLLFLVAYTRIWLCIL-----PFFLAH--QEIPGLDIIVDPCAAIIVLFGTGLLCVGIKE 635
            FLIA +AS  +  CYAE  +R P  GSAY Y+Y+ VGE   ++ G    LS  +       A++  +  +L      FF  +      GL    D  A  +VL   GLL  G+KE
Sbjct:   72 FLIAALASVMAGLCYAEFGARVPKTGSAYLYTYVTVGELWAFITGWNLILSYVIGTSSVARAWSGTFDELLNKQIGQFFKTYFKMNYTGLAEYPDFFAVCLVLLLAGLLSFGVKE 186          

HSP 2 Score: 41.5874 bits (96), Expect = 1.761e-12
Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  224 GVDSTLGAGAYILVGTVAREHSGPALTLSF 313
            GV STLGAG Y+L G VA+  SGP++ +SF
Sbjct:   43 GVGSTLGAGVYVLAGEVAKADSGPSIVVSF 72          
BLAST of EY756263 vs. ExPASy Swiss-Prot
Match: CTR3_RAT (Cationic amino acid transporter 3 OS=Rattus norvegicus GN=Slc7a3 PE=2 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 1.424e-11
Identity = 36/120 (30.00%), Postives = 56/120 (46.67%), Query Frame = 3
Query:  312 FLIAGIASAFSAFCYAELASRWPSAGSAYHYSYICVGEGVRWLIG*L*YLSTQLAGLLFLVAYTRIWLCILPFFLAH---QEIPGLDIIVDP---------CAAIIVLFGTGLLCVGIKE 635
            FL+A ++S  +  CYAE  +R P +GSAY YSY+ VGE   +  G     +  L+ ++   +  R W       + +   Q + G  ++  P          A  +VL  TGLL +G  E
Sbjct:   70 FLVAALSSVLAGLCYAEFGARVPGSGSAYLYSYVTVGELWAFTTG----WNLILSYVIGTASVARAWSSAFDNLIGNHISQTLKGTILLNMPHVLAEYPDFFALALVLLLTGLLVLGANE 185          

HSP 2 Score: 41.2022 bits (95), Expect = 1.424e-11
Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  224 GVDSTLGAGAYILVGTVAREHSGPALTLSF 313
            GV STLGAG Y+L G VA+E +GP++ + F
Sbjct:   41 GVGSTLGAGVYVLAGEVAKEKAGPSIVICF 70          
BLAST of EY756263 vs. ExPASy Swiss-Prot
Match: CTR4_MOUSE (Cationic amino acid transporter 4 OS=Mus musculus GN=Slc7a4 PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 4.039e-11
Identity = 37/119 (31.09%), Postives = 54/119 (45.38%), Query Frame = 3
Query:  312 FLIAGIASAFSAFCYAELASRWPSAGSAYHYSYICVGEGVRWLIG*L*YLSTQLAGLLFLVAYTRIWLCILPFFLAHQ------------EIPGLDIIVDPCAAIIVLFGTGLLCVGIK 632
            FL+A +AS  +A CYAE  +R P  GSAY ++Y+ +GE   +LIG     +  L  L+   A  R W   L     H             ++P L    D  AA I+L  +  +  G +
Sbjct:   75 FLVAAVASLLAALCYAEFGARVPRTGSAYLFTYVSMGEIWAFLIG----WNVLLEYLIGGAAVARAWSGYLDAIFNHSIRNFTESHLGVWQVPFLAHYPDFLAAGILLVASAFVSCGAR 189          

HSP 2 Score: 38.5058 bits (88), Expect = 4.039e-11
Identity = 16/30 (53.33%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  224 GVDSTLGAGAYILVGTVAREHSGPALTLSF 313
            GV   +G+G Y+L GTVA++ +GPA+ LSF
Sbjct:   46 GVGGMVGSGLYVLTGTVAKDMAGPAVLLSF 75          
BLAST of EY756263 vs. ExPASy Swiss-Prot
Match: CTR3_MOUSE (Cationic amino acid transporter 3 OS=Mus musculus GN=Slc7a3 PE=2 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 4.042e-11
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  312 FLIAGIASAFSAFCYAELASRWPSAGSAYHYSYICVGE 425
            FL+A ++S  +  CYAE  +R P +GSAY YSY+ VGE
Sbjct:   70 FLVAALSSVLAGLCYAEFGARVPGSGSAYLYSYVTVGE 107          

HSP 2 Score: 40.0466 bits (92), Expect = 4.042e-11
Identity = 16/30 (53.33%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  224 GVDSTLGAGAYILVGTVAREHSGPALTLSF 313
            GV STLGAG Y+L G VA++ +GP++ + F
Sbjct:   41 GVGSTLGAGVYVLAGEVAKDKAGPSIVICF 70          
BLAST of EY756263 vs. ExPASy Swiss-Prot
Match: CTR3_HUMAN (Cationic amino acid transporter 3 OS=Homo sapiens GN=SLC7A3 PE=1 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 5.246e-11
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  312 FLIAGIASAFSAFCYAELASRWPSAGSAYHYSYICVGE 425
            FL+A ++S  +  CYAE  +R P +GSAY YSY+ VGE
Sbjct:   70 FLVAALSSVLAGLCYAEFGARVPRSGSAYLYSYVTVGE 107          

HSP 2 Score: 40.0466 bits (92), Expect = 5.246e-11
Identity = 16/30 (53.33%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  224 GVDSTLGAGAYILVGTVAREHSGPALTLSF 313
            GV STLGAG Y+L G VA++ +GP++ + F
Sbjct:   41 GVGSTLGAGVYVLAGEVAKDKAGPSIVICF 70          
The following BLAST results are available for this feature:
BLAST of EY756263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CTR2_MOUSE1.761e-1234.78Low affinity cationic amino acid transporter 2 OS=... [more]
CTR3_RAT1.424e-1130.00Cationic amino acid transporter 3 OS=Rattus norveg... [more]
CTR4_MOUSE4.039e-1131.09Cationic amino acid transporter 4 OS=Mus musculus ... [more]
CTR3_MOUSE4.042e-1152.63Cationic amino acid transporter 3 OS=Mus musculus ... [more]
CTR3_HUMAN5.246e-1152.63Cationic amino acid transporter 3 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756263 ID=EY756263; Name=EY756263; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGATCTATGTTCAAGCCCTAATTTTTTCATTCTCAAAATTG
GCCTATCTATGTTCAAGCCCTAATTTTTTCATTCTCAAATTTGATATCTC
TAATTTTTTCATTCTCAAATTTGATATCTCTCTTCAGGCCCTACATTGCT
CAGTGGGAGGCATGAATCAGAATGAATAAAGCCGTACATTAGCTCGCTGG
GGAGCAACGCCGAATGAATAAAAGGTGTTGACTCAACACTTGGGGCTGGA
GCATATATTCTTGTTGGAACAGTTGCTAGAGAGCATTCAGGACCGGCACT
CACCCTTTCGTTTCCTTATAGCTGGAATAGCTTCTGCTTTTTCAGCCTTT
TGCTATGCTGAGCTTGCAAGTCGTTGGCCATCTGCTGGGAGTGCCTATCA
TTATTCATACATATGTGTTGGAGAAGGTGTTAGGTGGTTGATTGGCTAGC
TCTGATACTTGAGTACACAATTGGCGGGTCTGCTGTTCCTCGTGGCATAT
ACCCGAATCTGGTTGTGCATTCTTCCTTTCTTTTTGGCTCATCAAGAAAT
TCCTGGGCTTGACATTATTGTTGATCCCTGTGCTGCAATTATTGTACTTT
TTGGTACTGGACTCTTGTGTGTGGGAATCAAGGAGTTCTATCCACACTTC
AGTCATCAATTGATTATGTATCATTGCAATTTAGTCAGAGTTCTCTGGCT
ATTAGTGGGCAAAACCTTGNTGATGNTGGCACTTTGAAATAACTCAGCCT
TGGCCAAAAGGGTGGNAGCAGCAAGTATCCTTTTATTAAACGAGNTCAAG
GGGAGAATTCACCCGGATATGCTTGGNTCTATAAATATCTGGCATAGTGT
TTACTGAAAACTTTTGATGTGCCCAACCTCTTGGTACGAAACGAATGAAA
TGNATTAGTTGGACTCAATTGACAAG
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