EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CHLTA (Elongation factor Tu OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 2
Query:    8 SVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            +VYVL+KEEGGRH PFF GYRPQF+ RTTDVTG V+       E  +MVMPGD V+  V+LI PVA E+GMRFAIREGG+T+GAG I  II
Sbjct:  308 AVYVLQKEEGGRHKPFFTGYRPQFFFRTTDVTGVVTL-----PEGIEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIGAGTISKII 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CHLT2 (Elongation factor Tu OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=tuf PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 2
Query:    8 SVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            +VYVL+KEEGGRH PFF GYRPQF+ RTTDVTG V+       E  +MVMPGD V+  V+LI PVA E+GMRFAIREGG+T+GAG I  II
Sbjct:  308 AVYVLQKEEGGRHKPFFTGYRPQFFFRTTDVTGVVTL-----PEGVEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIGAGTISKII 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BUCAT (Elongation factor Tu OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A   G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGIEMVMPGDNIKMTVTLINPIAMADGLRFAIREGGRTVGAGVVSKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BUCAP (Elongation factor Tu OS=Buchnera aphidicola subsp. Schizaphis graminum GN=tuf PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A   G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGVEMVMPGDNIKMTVTLIHPIAMADGLRFAIREGGRTVGAGVVSKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BUCAI (Elongation factor Tu OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=tuf PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A   G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGIEMVMPGDNIKMTVTLINPIAMADGLRFAIREGGRTVGAGVVSKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BUCA5 (Elongation factor Tu OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A   G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPEGIEMVMPGDNIKMTVTLINPIAMADGLRFAIREGGRTVGAGVVSKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACST (Elongation factor Tu OS=Bacillus stearothermophilus GN=tuf PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG ++       E  +MVMPGD V+M VELI P+A E+G +F+IREGG+TVGAG +  IIE
Sbjct:  308 AQVYVLTKEEGGRHTPFFSNYRPQFYFRTTDVTGIITL-----PEGVEMVMPGDNVEMTVELIAPIAIEEGTKFSIREGGRTVGAGSVSEIIE 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACCQ (Elongation factor Tu OS=Bacillus cereus (strain Q1) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/93 (61.29%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD V+M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  308 AEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNVEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACC7 (Elongation factor Tu OS=Bacillus cereus (strain AH187) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/93 (61.29%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD V+M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  308 AEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNVEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACC1 (Elongation factor Tu OS=Bacillus cereus (strain ATCC 10987) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/93 (61.29%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD V+M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  308 AEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNVEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_CHLTA3.350e-2765.93Elongation factor Tu OS=Chlamydia trachomatis (str... [more]
EFTU_CHLT23.350e-2765.93Elongation factor Tu OS=Chlamydia trachomatis (str... [more]
EFTU_BUCAT3.350e-2761.96Elongation factor Tu OS=Buchnera aphidicola subsp.... [more]
EFTU_BUCAP3.350e-2761.96Elongation factor Tu OS=Buchnera aphidicola subsp.... [more]
EFTU_BUCAI3.350e-2761.96Elongation factor Tu OS=Buchnera aphidicola subsp.... [more]
EFTU_BUCA53.350e-2761.96Elongation factor Tu OS=Buchnera aphidicola subsp.... [more]
EFTU_BACST3.350e-2763.44Elongation factor Tu OS=Bacillus stearothermophilu... [more]
EFTU_BACCQ3.350e-2761.29Elongation factor Tu OS=Bacillus cereus (strain Q1... [more]
EFTU_BACC73.350e-2761.29Elongation factor Tu OS=Bacillus cereus (strain AH... [more]
EFTU_BACC13.350e-2761.29Elongation factor Tu OS=Bacillus cereus (strain AT... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
back to top