EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_SINMW (Elongation factor Tu OS=Sinorhizobium medicae (strain WSM419) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V+       E ++MVMPGD V + VELI+P+A E+ +RFAIREGG+TVGAG++ SI+E
Sbjct:  304 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVTL-----PEGTEMVMPGDNVTVDVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE 391          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_RHIME (Elongation factor Tu OS=Rhizobium meliloti GN=tufA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V+       E ++MVMPGD V + VELI+P+A E+ +RFAIREGG+TVGAG++ SI+E
Sbjct:  304 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVTL-----PEGTEMVMPGDNVTVDVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE 391          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_PSYCK (Elongation factor Tu OS=Psychrobacter cryohalolentis (strain K5) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            A VYVL KEEGGRH+PF  GYRPQFY RTTDVTG +        + ++MVMPGD V+M VELI P+A ++G+RFAIREGG+TVGAGV+ +++
Sbjct:  309 AEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAIQL-----QDGTEMVMPGDNVEMGVELIHPIAMDKGLRFAIREGGRTVGAGVVANVL 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_JANMA (Elongation factor Tu OS=Janthinobacterium sp. (strain Marseille) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            +YVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  311 IYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_HERAR (Elongation factor Tu OS=Herminiimonas arsenicoxydans GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            +YVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  311 IYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACLD (Elongation factor Tu OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG +        E  +MVMPGD ++M VELI  +A E G RF+IREGG+TVG+GV+ SIIE
Sbjct:  309 AEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGIIQL-----PEGVEMVMPGDNIEMTVELISTIAIEDGTRFSIREGGRTVGSGVVSSIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACHK (Elongation factor Tu OS=Bacillus thuringiensis subsp. konkukian GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  308 AEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACCZ (Elongation factor Tu OS=Bacillus cereus (strain ZK / E33L) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  308 AEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACCR (Elongation factor Tu OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  308 AEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACC4 (Elongation factor Tu OS=Bacillus cereus (strain B4264) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  308 AEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_SINMW4.375e-2762.37Elongation factor Tu OS=Sinorhizobium medicae (str... [more]
EFTU_RHIME4.375e-2762.37Elongation factor Tu OS=Rhizobium meliloti GN=tufA... [more]
EFTU_PSYCK4.375e-2761.96Elongation factor Tu OS=Psychrobacter cryohalolent... [more]
EFTU_JANMA4.375e-2767.03Elongation factor Tu OS=Janthinobacterium sp. (str... [more]
EFTU_HERAR4.375e-2767.03Elongation factor Tu OS=Herminiimonas arsenicoxyda... [more]
EFTU_BACLD4.375e-2763.44Elongation factor Tu OS=Bacillus licheniformis (st... [more]
EFTU_BACHK4.375e-2760.22Elongation factor Tu OS=Bacillus thuringiensis sub... [more]
EFTU_BACCZ4.375e-2760.22Elongation factor Tu OS=Bacillus cereus (strain ZK... [more]
EFTU_BACCR4.375e-2760.22Elongation factor Tu OS=Bacillus cereus (strain AT... [more]
EFTU_BACC44.375e-2760.22Elongation factor Tu OS=Bacillus cereus (strain B4... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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