EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURMA (Elongation factor Tu OS=Burkholderia mallei GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURM9 (Elongation factor Tu OS=Burkholderia mallei (strain NCTC 10229) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURM7 (Elongation factor Tu OS=Burkholderia mallei (strain NCTC 10247) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURCM (Elongation factor Tu OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURCH (Elongation factor Tu OS=Burkholderia cenocepacia (strain HI2424) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURCA (Elongation factor Tu OS=Burkholderia cenocepacia (strain AU 1054) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_VIBVY (Elongation factor Tu 1 OS=Vibrio vulnificus (strain YJ016) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            + VYVL K+EGGRH+PFF GYRPQFY RTTDVTG +S       E  +MVMPGD ++MVVELI P+A ++G+RFAIREGG+TVGAGV+  I
Sbjct:  307 SEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGDISL-----PEGVEMVMPGDNIQMVVELISPIAMDEGLRFAIREGGRTVGAGVVAKI 392          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_XANC5 (Elongation factor Tu OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF GYRPQFY RTTD+TG          E  +MVMPGD VKMVV LI PVA ++G+RFAIREGG+TVGAGV+  II+
Sbjct:  309 AEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDITGACQL-----PEGVEMVMPGDNVKMVVTLINPVAMDEGLRFAIREGGRTVGAGVVAKIIK 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_XANAC (Elongation factor Tu OS=Xanthomonas axonopodis pv. citri GN=tufA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF GYRPQFY RTTD+TG          E  +MVMPGD VKMVV LI PVA ++G+RFAIREGG+TVGAGV+  II+
Sbjct:  309 AEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDITGACQL-----PEGVEMVMPGDNVKMVVTLINPVAMDEGLRFAIREGGRTVGAGVVAKIIK 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_THET2 (Elongation factor Tu OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28
Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            ASVYVLKKEEGGRH+ FF+GYRPQFY RTTDVTG V           +MVMPGD V   VELI PVA E+G+RFAIREGG+TVGAGV+  I+E
Sbjct:  319 ASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQL-----PPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 406          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BURMA3.957e-2867.74Elongation factor Tu OS=Burkholderia mallei GN=tuf... [more]
EFTU_BURM93.957e-2867.74Elongation factor Tu OS=Burkholderia mallei (strai... [more]
EFTU_BURM73.957e-2867.74Elongation factor Tu OS=Burkholderia mallei (strai... [more]
EFTU_BURCM3.957e-2867.74Elongation factor Tu OS=Burkholderia ambifaria (st... [more]
EFTU_BURCH3.957e-2867.74Elongation factor Tu OS=Burkholderia cenocepacia (... [more]
EFTU_BURCA3.957e-2867.74Elongation factor Tu OS=Burkholderia cenocepacia (... [more]
EFTU1_VIBVY3.957e-2864.84Elongation factor Tu 1 OS=Vibrio vulnificus (strai... [more]
EFTU_XANC55.168e-2865.59Elongation factor Tu OS=Xanthomonas campestris pv.... [more]
EFTU_XANAC5.168e-2865.59Elongation factor Tu OS=Xanthomonas axonopodis pv.... [more]
EFTU_THET25.168e-2867.74Elongation factor Tu OS=Thermus thermophilus (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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