EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_THET8 (Elongation factor Tu-A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tufA PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28
Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            ASVYVLKKEEGGRH+ FF+GYRPQFY RTTDVTG V           +MVMPGD V   VELI PVA E+G+RFAIREGG+TVGAGV+  I+E
Sbjct:  319 ASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQL-----PPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 406          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_WOLSU (Elongation factor Tu OS=Wolinella succinogenes GN=tuf PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 62/89 (69.66%), Postives = 70/89 (78.65%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG +S       E  +MVMPGD VK+ VELI PVA E+G RFAIREGG+TVGAGV+  I
Sbjct:  314 VYVLSKEEGGRHTPFFNGYRPQFYVRTTDVTGSIS-----LPEGVEMVMPGDNVKINVELIAPVALEEGTRFAIREGGRTVGAGVVTKI 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_THEMA (Elongation factor Tu OS=Thermotoga maritima GN=tuf PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A +YVLKKEEGGRH+PF  GY+PQFY+RT DVTG +  +     E  +MVMPGD V+M +ELI PVA E+G RFA+REGG+TVGAGV+  +IE
Sbjct:  312 AQIYVLKKEEGGRHTPFTKGYKPQFYIRTADVTGEIVGL----PEGVEMVMPGDHVEMEIELIYPVAIEKGQRFAVREGGRTVGAGVVTEVIE 400          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_SODGM (Elongation factor Tu OS=Sodalis glossinidius (strain morsitans) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_GEOMG (Elongation factor Tu OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF GYRPQFY RTTDVTG V     D    ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE
Sbjct:  309 AEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGIV-----DLPAGTEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_DESVM (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF+GYRPQFY RTTD+TG ++       +  +MVMPGD     VELI P+A EQG+RFAIREGG+TVGAGV+  I+E
Sbjct:  310 AEVYVLSKEEGGRHTPFFSGYRPQFYFRTTDITGIIALA-----DGVEMVMPGDNSTFTVELIAPIAMEQGLRFAIREGGRTVGAGVVSEILE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_COLP3 (Elongation factor Tu OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL K+EGGRH+PFF GYRPQFY RTTD+TG V     +  E  +MVMPGD +K VVELI PVA ++G+RFAIREGG+TVGAGV+  I+
Sbjct:  307 SEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDITGAV-----ELPEGVEMVMPGDNLKFVVELINPVAMDEGLRFAIREGGRTVGAGVVSKIM 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CLOPS (Elongation factor Tu OS=Clostridium perfringens (strain SM101 / Type A) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG +        E  +MVMPGD + M VELI  +A ++G+RFAIREGG+TVG+GV+ SIIE
Sbjct:  312 VYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIK-----LPEGMEMVMPGDHIDMEVELITEIAMDEGLRFAIREGGRTVGSGVVTSIIE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CLOPE (Elongation factor Tu OS=Clostridium perfringens GN=tufA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG +        E  +MVMPGD + M VELI  +A ++G+RFAIREGG+TVG+GV+ SIIE
Sbjct:  312 VYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIK-----LPEGMEMVMPGDHIDMEVELITEIAMDEGLRFAIREGGRTVGSGVVTSIIE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CLOP1 (Elongation factor Tu OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG +        E  +MVMPGD + M VELI  +A ++G+RFAIREGG+TVG+GV+ SIIE
Sbjct:  312 VYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIK-----LPEGMEMVMPGDHIDMEVELITEIAMDEGLRFAIREGGRTVGSGVVTSIIE 397          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU1_THET85.168e-2867.74Elongation factor Tu-A OS=Thermus thermophilus (st... [more]
EFTU_WOLSU6.750e-2869.66Elongation factor Tu OS=Wolinella succinogenes GN=... [more]
EFTU_THEMA6.750e-2862.37Elongation factor Tu OS=Thermotoga maritima GN=tuf... [more]
EFTU_SODGM6.750e-2861.96Elongation factor Tu OS=Sodalis glossinidius (stra... [more]
EFTU_GEOMG6.750e-2864.52Elongation factor Tu OS=Geobacter metallireducens ... [more]
EFTU_DESVM6.750e-2863.44Elongation factor Tu OS=Desulfovibrio vulgaris (st... [more]
EFTU_COLP36.750e-2864.13Elongation factor Tu OS=Colwellia psychrerythraea ... [more]
EFTU_CLOPS6.750e-2865.93Elongation factor Tu OS=Clostridium perfringens (s... [more]
EFTU_CLOPE6.750e-2865.93Elongation factor Tu OS=Clostridium perfringens GN... [more]
EFTU_CLOP16.750e-2865.93Elongation factor Tu OS=Clostridium perfringens (s... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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