EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_THICU (Elongation factor Tu OS=Thiobacillus cuprinus GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG +      KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIEL---PKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_TERTT (Elongation factor Tu OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            + VYVL K+EGGRH+PFF GYRPQFY RTTDVTG       +  E  +MVMPGD ++M V LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  320 SEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGAC-----ELPEGVEMVMPGDNIQMTVTLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 407          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_SULNB (Elongation factor Tu OS=Sulfurovum sp. (strain NBC37-1) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            A VYVL KEEGGRH+PFF  YRPQFY+RTTDVTG V        E ++MVMPGD VK+ VELI P+A ++G RFAIREGG+TVGAGV+  II
Sbjct:  315 AEVYVLTKEEGGRHTPFFDNYRPQFYVRTTDVTGSVKL-----QEGTEMVMPGDNVKINVELIAPIALDEGTRFAIREGGRTVGAGVVSKII 401          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_NITEU (Elongation factor Tu OS=Nitrosomonas europaea GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A +YVL KEEGGRH+PFFAGYRPQFY RTTDVTG +     +     +MVMPGD + + V LI P+A ++G+RFAIREGG+TVGAGV+  +IE
Sbjct:  309 AEIYVLSKEEGGRHTPFFAGYRPQFYFRTTDVTGSI-----ELPAGVEMVMPGDNISVTVNLIAPIAMDEGLRFAIREGGRTVGAGVVAKVIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_MARMM (Elongation factor Tu OS=Maricaulis maris (strain MCS10) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V+      +E ++MVMPGD ++M VELI+P+A E+ +RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVTL-----NEGTEMVMPGDNIEMNVELIVPIAMEEKLRFAIREGGRTVGAGVVSKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_HELPY (Elongation factor Tu OS=Helicobacter pylori GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            +YVL KEEGGRH+PFF  YRPQFY+RTTDVTG ++       E  +MVMPGD VK+ VELI PVA E G +FAIREGG+TVGAGV+ +IIE
Sbjct:  314 IYVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSITL-----PEGVEMVMPGDNVKITVELISPVALELGTKFAIREGGRTVGAGVVSNIIE 399          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_HELPS (Elongation factor Tu OS=Helicobacter pylori (strain Shi470) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            +YVL KEEGGRH+PFF  YRPQFY+RTTDVTG ++       E  +MVMPGD VK+ VELI PVA E G +FAIREGG+TVGAGV+ +IIE
Sbjct:  314 IYVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSITL-----PEGVEMVMPGDNVKITVELISPVALELGTKFAIREGGRTVGAGVVSNIIE 399          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_HELPJ (Elongation factor Tu OS=Helicobacter pylori J99 GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            +YVL KEEGGRH+PFF  YRPQFY+RTTDVTG ++       E  +MVMPGD VK+ VELI PVA E G +FAIREGG+TVGAGV+ +IIE
Sbjct:  314 IYVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSITL-----PEGVEMVMPGDNVKITVELISPVALELGTKFAIREGGRTVGAGVVSNIIE 399          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_HELPG (Elongation factor Tu OS=Helicobacter pylori (strain G27) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            +YVL KEEGGRH+PFF  YRPQFY+RTTDVTG ++       E  +MVMPGD VK+ VELI PVA E G +FAIREGG+TVGAGV+ +IIE
Sbjct:  314 IYVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSITL-----PEGVEMVMPGDNVKITVELISPVALELGTKFAIREGGRTVGAGVVSNIIE 399          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_HELP2 (Elongation factor Tu OS=Helicobacter pylori (strain P12) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.816e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            +YVL KEEGGRH+PFF  YRPQFY+RTTDVTG ++       E  +MVMPGD VK+ VELI PVA E G +FAIREGG+TVGAGV+ +IIE
Sbjct:  314 IYVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSITL-----PEGVEMVMPGDNVKITVELISPVALELGTKFAIREGGRTVGAGVVSNIIE 399          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_THICU8.816e-2865.59Elongation factor Tu OS=Thiobacillus cuprinus GN=t... [more]
EFTU_TERTT8.816e-2863.44Elongation factor Tu OS=Teredinibacter turnerae (s... [more]
EFTU_SULNB8.816e-2866.30Elongation factor Tu OS=Sulfurovum sp. (strain NBC... [more]
EFTU_NITEU8.816e-2861.29Elongation factor Tu OS=Nitrosomonas europaea GN=t... [more]
EFTU_MARMM8.816e-2863.44Elongation factor Tu OS=Maricaulis maris (strain M... [more]
EFTU_HELPY8.816e-2865.93Elongation factor Tu OS=Helicobacter pylori GN=tuf... [more]
EFTU_HELPS8.816e-2865.93Elongation factor Tu OS=Helicobacter pylori (strai... [more]
EFTU_HELPJ8.816e-2865.93Elongation factor Tu OS=Helicobacter pylori J99 GN... [more]
EFTU_HELPG8.816e-2865.93Elongation factor Tu OS=Helicobacter pylori (strai... [more]
EFTU_HELP28.816e-2865.93Elongation factor Tu OS=Helicobacter pylori (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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