EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_MARMS (Elongation factor Tu OS=Marinomonas sp. (strain MWYL1) GN=tuf PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.151e-27
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF GYRPQFY RTTDVTG  S       E  +MVMPGD ++M VELI P+A ++G+RFAIREGG+TVGAGV+  I++
Sbjct:  320 AEVYVLGKDEGGRHTPFFKGYRPQFYFRTTDVTGACSL-----PEGVEMVMPGDNIQMTVELIHPIAMDEGLRFAIREGGRTVGAGVVAKILK 407          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_JANSC (Elongation factor Tu OS=Jannaschia sp. (strain CCS1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.151e-27
Identity = 60/93 (64.52%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFFA YRPQFY RTTDVTG V+         ++MVMPGD +K  VELI P+A E G+RFAIREGG+TVGAGV+  IIE
Sbjct:  304 AEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVNLPAG-----TEMVMPGDNLKFEVELIAPIAMEDGLRFAIREGGRTVGAGVVAKIIE 391          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ERWCT (Elongation factor Tu OS=Erwinia carotovora subsp. atroseptica GN=tuf1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.151e-27
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BUCCC (Elongation factor Tu OS=Buchnera aphidicola subsp. Cinara cedri GN=tuf PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.151e-27
Identity = 58/92 (63.04%), Postives = 70/92 (76.09%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD + MVV LI P+A  +G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSI-----ELPENIEMVMPGDNINMVVTLIHPIAMAEGLRFAIREGGRTVGAGVVTKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_PSEHT (Elongation factor Tu 2 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.151e-27
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL K+EGGRH+PFF GYRPQFY RTTDVTG V        E  +MVMPGD VKM V LI P+A ++G+RFAIREGG+TVGAGV+ +I+
Sbjct:  307 SEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGDVQL-----PEGVEMVMPGDNVKMTVTLIAPIAMDEGLRFAIREGGRTVGAGVVANIV 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_PSEHT (Elongation factor Tu 1 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.151e-27
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL K+EGGRH+PFF GYRPQFY RTTDVTG V        E  +MVMPGD VKM V LI P+A ++G+RFAIREGG+TVGAGV+ +I+
Sbjct:  307 SEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGDVQL-----PEGVEMVMPGDNVKMTVTLIAPIAMDEGLRFAIREGGRTVGAGVVANIV 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_MYXXD (Elongation factor Tu 1 OS=Myxococcus xanthus (strain DK 1622) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.151e-27
Identity = 60/93 (64.52%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A +YVL KEEGGRH+PFF GYRPQFY RTTDVTG V        E  +MVMPGD + + VELI PVA E+ +RFA+REGG+TVGAGV+  IIE
Sbjct:  309 AQIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSVK-----LPENVEMVMPGDNIAIEVELITPVAMEKELRFAVREGGRTVGAGVVAEIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_THICR (Elongation factor Tu OS=Thiomicrospira crunogena (strain XCL-2) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.504e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF GYRPQFY RTTDVTG       +    ++MVMPGD V+M VELI P+A  +G+RFAIREGG+TVGAGV+  II+
Sbjct:  309 AEVYVLSKDEGGRHTPFFQGYRPQFYFRTTDVTGAC-----ELPAGTEMVMPGDNVQMTVELINPIAMNEGLRFAIREGGRTVGAGVVAKIID 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_RHIRD (Elongation factor Tu OS=Rhizobium radiobacter GN=tufA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.504e-27
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG VS       E ++MVMPGD V + VELI+P+A E+ +RFAIREGG+TVGAG++ SI+E
Sbjct:  304 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVSL-----PEGTEMVMPGDNVTVEVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE 391          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_RALSO (Elongation factor Tu OS=Ralstonia solanacearum GN=tufA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.504e-27
Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            VY+L K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  311 VYILSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_MARMS1.151e-2763.44Elongation factor Tu OS=Marinomonas sp. (strain MW... [more]
EFTU_JANSC1.151e-2764.52Elongation factor Tu OS=Jannaschia sp. (strain CCS... [more]
EFTU_ERWCT1.151e-2761.96Elongation factor Tu OS=Erwinia carotovora subsp. ... [more]
EFTU_BUCCC1.151e-2763.04Elongation factor Tu OS=Buchnera aphidicola subsp.... [more]
EFTU2_PSEHT1.151e-2764.13Elongation factor Tu 2 OS=Pseudoalteromonas halopl... [more]
EFTU1_PSEHT1.151e-2764.13Elongation factor Tu 1 OS=Pseudoalteromonas halopl... [more]
EFTU1_MYXXD1.151e-2764.52Elongation factor Tu 1 OS=Myxococcus xanthus (stra... [more]
EFTU_THICR1.504e-2763.44Elongation factor Tu OS=Thiomicrospira crunogena (... [more]
EFTU_RHIRD1.504e-2763.44Elongation factor Tu OS=Rhizobium radiobacter GN=t... [more]
EFTU_RALSO1.504e-2767.03Elongation factor Tu OS=Ralstonia solanacearum GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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