EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ECOLI (Elongation factor Tu OS=Escherichia coli (strain K12) GN=tufA PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ECOL6 (Elongation factor Tu OS=Escherichia coli O6 GN=tufA PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ECO57 (Elongation factor Tu OS=Escherichia coli O157:H7 GN=tufA PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CHLFF (Elongation factor Tu OS=Chlamydophila felis (strain Fe/C-56) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 2
Query:    8 SVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            +VY+L+KEEGGRH PFF GYRPQF+ RTTDVTG V+       E ++MVMPGD V++ V+LI PVA E+GMRFAIREGG+T+GAG I  II
Sbjct:  308 AVYILQKEEGGRHKPFFTGYRPQFFFRTTDVTGIVNL-----PEGTEMVMPGDNVEIDVQLISPVALEEGMRFAIREGGRTIGAGTISKII 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CHLCV (Elongation factor Tu OS=Chlamydophila caviae GN=tuf PE=3 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 2
Query:    8 SVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            +VY+L+KEEGGRH PFF GYRPQF+ RTTDVTG V+       E ++MVMPGD V+  V+LI PVA E+GMRFAIREGG+T+GAG I  II
Sbjct:  308 AVYILQKEEGGRHKPFFTGYRPQFFFRTTDVTGVVTL-----PEGTEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIGAGTISKII 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CAMHC (Elongation factor Tu OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 59/92 (64.13%), Postives = 70/92 (76.09%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            A VY+L KEEGGRH+PFF  YRPQFY+RTTDVTG +        E ++MVMPGD VK+ VELI P+A EQG RFAIREGG TVG+GV+  I+
Sbjct:  312 AEVYILTKEEGGRHTPFFNNYRPQFYVRTTDVTGSIQL-----PEGTEMVMPGDNVKITVELIHPIALEQGTRFAIREGGHTVGSGVVSKIL 398          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BLOPB (Elongation factor Tu OS=Blochmannia pennsylvanicus (strain BPEN) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 53/92 (57.61%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTD+TG +     +  E + MVMPGD ++M+V LI P+A + G+RFAIREGG+T+GAG++  II
Sbjct:  307 SEVYILNKDEGGRHTPFFKGYRPQFYFRTTDITGTI-----ELPEGADMVMPGDNIRMIVHLIAPIAMDDGLRFAIREGGRTIGAGIVSKII 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_AZOSE (Elongation factor Tu OS=Azoarcus sp. (strain EbN1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            VYVL KEEGGRH+PFF  YRPQFY RTTDVTG +     +  E ++MVMPGD V + V+L+ P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  311 VYVLSKEEGGRHTPFFNNYRPQFYFRTTDVTGSI-----ELPEGTEMVMPGDNVSITVKLMAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_AZOPC (Elongation factor Tu OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=tuf PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VY+LKKEEGGRH+PF   YRPQFY+RT DVTG ++       E ++MVMPGD V + +ELI PVAC +G+RFAIREGG+TVGAG I  IIE
Sbjct:  308 AEVYILKKEEGGRHTPFHNKYRPQFYVRTLDVTGEITL-----PEGTEMVMPGDNVTITIELIYPVACNEGLRFAIREGGRTVGAGQITEIIE 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ARCB4 (Elongation factor Tu OS=Arcobacter butzleri (strain RM4018) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 57/90 (63.33%), Postives = 72/90 (80.00%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            VY+L KEEGGRH+PFF+GYRPQFY+RTTDVTG  +       E ++MVMPGD V+M VEL+ P+A ++G +FAIREGG+TVGAGV+  II
Sbjct:  317 VYILSKEEGGRHTPFFSGYRPQFYVRTTDVTGSCTL-----PEGTEMVMPGDNVEMTVELVAPIALDKGTKFAIREGGRTVGAGVVAEII 401          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_ECOLI1.964e-2760.87Elongation factor Tu OS=Escherichia coli (strain K... [more]
EFTU_ECOL61.964e-2760.87Elongation factor Tu OS=Escherichia coli O6 GN=tuf... [more]
EFTU_ECO571.964e-2760.87Elongation factor Tu OS=Escherichia coli O157:H7 G... [more]
EFTU_CHLFF1.964e-2764.84Elongation factor Tu OS=Chlamydophila felis (strai... [more]
EFTU_CHLCV1.964e-2764.84Elongation factor Tu OS=Chlamydophila caviae GN=tu... [more]
EFTU_CAMHC1.964e-2764.13Elongation factor Tu OS=Campylobacter hominis (str... [more]
EFTU_BLOPB1.964e-2757.61Elongation factor Tu OS=Blochmannia pennsylvanicus... [more]
EFTU_AZOSE1.964e-2763.74Elongation factor Tu OS=Azoarcus sp. (strain EbN1)... [more]
EFTU_AZOPC1.964e-2763.44Elongation factor Tu OS=Azobacteroides pseudotrich... [more]
EFTU_ARCB41.964e-2763.33Elongation factor Tu OS=Arcobacter butzleri (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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