EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_SHIF8 (Elongation factor Tu 1 OS=Shigella flexneri serotype 5b (strain 8401) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVQMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESR (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-7) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+  I
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESM (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-4) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+  I
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEON (Elongation factor Tu 1 OS=Shewanella oneidensis GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+  I
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_PSEPK (Elongation factor Tu-A OS=Pseudomonas putida (strain KT2440) GN=tufA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 60/93 (64.52%), Postives = 69/93 (74.19%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG       +  E  +MVMPGD ++M V LI  +A E G+RFAIREGG+TVGAGV+  IIE
Sbjct:  310 AEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOUT (Elongation factor Tu 1 OS=Escherichia coli (strain UTI89 / UPEC) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOLC (Elongation factor Tu 1 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOL5 (Elongation factor Tu 1 OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOK1 (Elongation factor Tu 1 OS=Escherichia coli O1:K1 / APEC GN=tuf1 PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOHS (Elongation factor Tu 1 OS=Escherichia coli O9:H4 (strain HS) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.964e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  ++
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU1_SHIF81.964e-2760.87Elongation factor Tu 1 OS=Shigella flexneri seroty... [more]
EFTU1_SHESR1.964e-2763.74Elongation factor Tu 1 OS=Shewanella sp. (strain M... [more]
EFTU1_SHESM1.964e-2763.74Elongation factor Tu 1 OS=Shewanella sp. (strain M... [more]
EFTU1_SHEON1.964e-2763.74Elongation factor Tu 1 OS=Shewanella oneidensis GN... [more]
EFTU1_PSEPK1.964e-2764.52Elongation factor Tu-A OS=Pseudomonas putida (stra... [more]
EFTU1_ECOUT1.964e-2760.87Elongation factor Tu 1 OS=Escherichia coli (strain... [more]
EFTU1_ECOLC1.964e-2760.87Elongation factor Tu 1 OS=Escherichia coli (strain... [more]
EFTU1_ECOL51.964e-2760.87Elongation factor Tu 1 OS=Escherichia coli O6:K15:... [more]
EFTU1_ECOK11.964e-2760.87Elongation factor Tu 1 OS=Escherichia coli O1:K1 /... [more]
EFTU1_ECOHS1.964e-2760.87Elongation factor Tu 1 OS=Escherichia coli O9:H4 (... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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