EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CHLTE (Elongation factor Tu OS=Chlorobium tepidum GN=tuf PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.565e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VY+LKKEEGGRH+PFF GYRPQFY RTTDVTG V+       E  +MVMPGD + + VELI P+A E+ +RFAIREGG+TVGAG +  I+E
Sbjct:  306 AEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVT-----LPEGVEMVMPGDNLSIDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CHLP8 (Elongation factor Tu OS=Chlorobaculum parvum (strain NCIB 8327) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.565e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VY+LKKEEGGRH+PFF GYRPQFY RTTDVTG V+       E  +MVMPGD + + VELI P+A E+ +RFAIREGG+TVGAG +  I+E
Sbjct:  306 AEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVT-----LPEGVEMVMPGDNLSVDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_RHORT (Elongation factor Tu 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.565e-27
Identity = 55/90 (61.11%), Postives = 72/90 (80.00%), Query Frame = 2
Query:   14 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            Y+L KEEGGRH+PFF+ YRPQFY RTTDVTG +     +  E ++MVMPGD + M V+LI P+A ++G+RFAIREGG+TVGAGV+ SI++
Sbjct:  312 YILTKEEGGRHTPFFSNYRPQFYFRTTDVTGTI-----ELPEGTEMVMPGDNIGMTVQLIAPIAMDEGLRFAIREGGRTVGAGVVASIVQ 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_METFK (Elongation factor Tu 2 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.565e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A +YVL K+EGGRH+PFF GYRPQFY RTTDVTG V     +    ++MVMPGD V + V LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEIYVLGKDEGGRHTPFFNGYRPQFYFRTTDVTGAV-----ELPAGTEMVMPGDNVSISVSLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPN (Elongation factor Tu 1 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tuf1 PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.565e-27
Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            + VY+L K+EGGRH+PFF GYRPQFY RT DVTG +     +  E  +MVMPGD V MVV LI P+A + G+RFAIREGG+TVGAGV+  +IE
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTIDVTGTI-----ELPEGVEMVMPGDNVNMVVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVIE 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_RHORT (Elongation factor Tu 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.565e-27
Identity = 55/90 (61.11%), Postives = 72/90 (80.00%), Query Frame = 2
Query:   14 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            Y+L KEEGGRH+PFF+ YRPQFY RTTDVTG +     +  E ++MVMPGD + M V+LI P+A ++G+RFAIREGG+TVGAGV+ SI++
Sbjct:  312 YILTKEEGGRHTPFFSNYRPQFYFRTTDVTGTI-----ELPEGTEMVMPGDNIGMTVQLIAPIAMDEGLRFAIREGGRTVGAGVVASIVQ 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_METFK (Elongation factor Tu 1 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.565e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A +YVL K+EGGRH+PFF GYRPQFY RTTDVTG V     +    ++MVMPGD V + V LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEIYVLGKDEGGRHTPFFNGYRPQFYFRTTDVTGAV-----ELPAGTEMVMPGDNVSISVSLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_SYNFM (Elongation factor Tu OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 62/93 (66.67%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG ++       E  +MVMPGD +   V LI PVA E+ +RFAIREGG+TVGAGVI  IIE
Sbjct:  310 AEVYVLKKEEGGRHTPFFPGYRPQFYFRTTDVTGIMT-----LPEGVEMVMPGDNISTEVHLITPVALEKELRFAIREGGRTVGAGVITEIIE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_SYNAS (Elongation factor Tu OS=Syntrophus aciditrophicus (strain SB) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG V+ +     E  +MVMPGD V+M V LI P+A E+ +RFAIREGG+TVGAGV+  +IE
Sbjct:  310 AQVYVLTKEEGGRHTPFFTGYRPQFYFRTTDVTG-VAKLA----EGVEMVMPGDNVEMEVTLITPIAMEEQLRFAIREGGRTVGAGVVSKVIE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_STAES (Elongation factor Tu OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tuf PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG V+       E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  I E
Sbjct:  307 AEVYVLSKDEGGRHTPFFTNYRPQFYFRTTDVTGVVNL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIFE 394          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_CHLTE2.565e-2763.44Elongation factor Tu OS=Chlorobium tepidum GN=tuf ... [more]
EFTU_CHLP82.565e-2763.44Elongation factor Tu OS=Chlorobaculum parvum (stra... [more]
EFTU2_RHORT2.565e-2761.11Elongation factor Tu 2 OS=Rhodospirillum rubrum (s... [more]
EFTU2_METFK2.565e-2763.44Elongation factor Tu 2 OS=Methylobacillus flagella... [more]
EFTU1_YERPN2.565e-2761.29Elongation factor Tu 1 OS=Yersinia pestis bv. Anti... [more]
EFTU1_RHORT2.565e-2761.11Elongation factor Tu 1 OS=Rhodospirillum rubrum (s... [more]
EFTU1_METFK2.565e-2763.44Elongation factor Tu 1 OS=Methylobacillus flagella... [more]
EFTU_SYNFM3.350e-2766.67Elongation factor Tu OS=Syntrophobacter fumaroxida... [more]
EFTU_SYNAS3.350e-2765.59Elongation factor Tu OS=Syntrophus aciditrophicus ... [more]
EFTU_STAES3.350e-2763.44Elongation factor Tu OS=Staphylococcus epidermidis... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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