EY756242

Overview
NameEY756242
Unique NameEY756242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length561
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 6.662e-33
Identity = 70/140 (50.00%), Postives = 86/140 (61.43%), Query Frame = 1
Query:    4 RVRGTVSFAQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417
            +V GTV F QE +  PTT++  ++G       GFH+H  GD TNGC S GPHFNP GK HGAP D+ RH              A  +V D  + L GP+S+IGR VV+HA  DDLGKG +E S  TGNAG R ACG+IG+
Sbjct:   13 KVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_NEUCR (Superoxide dismutase [Cu-Zn] OS=Neurospora crassa GN=sod-1 PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 8.701e-33
Identity = 72/139 (51.80%), Postives = 84/139 (60.43%), Query Frame = 1
Query:    7 VRGTVSFAQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417
            V+GTV F QE +  PTT++  +SG  P    GFH+H  GD TNGC S GPHFNP G  HG    + RH              A  TV DN + L GP S+IGR VVVHA  DDLGKGG+E S  TGNAG R ACG+IG+
Sbjct:   14 VKGTVIFEQESESAPTTITYDISGNDPNAKRGFHIHTFGDNTNGCTSAGPHFNPHGTTHGDRTAEVRHVGDLGNIETDAQGNAKGTVTDNLVKLIGPESVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGI 152          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_BOTFU (Superoxide dismutase [Cu-Zn] OS=Botryotinia fuckeliana GN=sod1 PE=3 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.136e-32
Identity = 71/140 (50.71%), Postives = 89/140 (63.57%), Query Frame = 1
Query:    4 RVRGTVSFAQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417
            ++ GTV+F Q E + PTT++ +++G       G HVH  GD TNGC S GPHFNP G+ HGAP D+ RH              AT +V D+ I L GP S+IGR VVVH+  DDLGKG +E SK TGNAG R ACG+IG+
Sbjct:   13 KISGTVTFEQSEENSPTTITWNITGNDANAERGMHVHQFGDNTNGCTSAGPHFNPHGQTHGAPTDEVRHVGDLGNFKTDAQGNATGSVQDSHIKLIGPLSVIGRTVVVHSGTDDLGKGENEESKKTGNAGTRPACGVIGI 152          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_ASPOR (Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae GN=sodC PE=3 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.136e-32
Identity = 69/140 (49.29%), Postives = 86/140 (61.43%), Query Frame = 1
Query:    4 RVRGTVSFAQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417
            ++ GTV+F Q + + PTTVS +++G        FHVH  GD TNGC S GPHFNP GKEHGAPED+NRH              A  +  D  I L G  S++GR +V+HA  DDLG+  H  SK TGNAG R ACG+IG+
Sbjct:   13 KISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIGI 152          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_ASPFL (Superoxide dismutase [Cu-Zn] OS=Aspergillus flavus GN=sodC PE=3 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.136e-32
Identity = 69/140 (49.29%), Postives = 86/140 (61.43%), Query Frame = 1
Query:    4 RVRGTVSFAQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417
            ++ GTV+F Q + + PTTVS +++G        FHVH  GD TNGC S GPHFNP GKEHGAPED+NRH              A  +  D  I L G  S++GR +V+HA  DDLG+  H  SK TGNAG R ACG+IG+
Sbjct:   12 KISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIGI 151          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_YARLI (Superoxide dismutase [Cu-Zn] OS=Yarrowia lipolytica GN=SOD1 PE=3 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 1.484e-32
Identity = 70/140 (50.00%), Postives = 83/140 (59.29%), Query Frame = 1
Query:    4 RVRGTVSFAQEGD-GPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417
            +V GTV+F Q+ + GP TV+  + G  P    GFHVH  GD TNGC S GPHFNP  K HG P D  RH              A   + D+ + L+G NSI+GR VV+H   DDLGKGGH  S  TGNAG R ACG+IGL
Sbjct:   13 KVSGTVTFEQDSESGPVTVTYDIKGNDPNAERGFHVHEFGDNTNGCTSAGPHFNPFKKNHGGPTDSERHVGDLGNVKTDSEGVAKGVLKDSLLKLTGDNSIVGRTVVIHGGEDDLGKGGHADSLKTGNAGPRPACGVIGL 152          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_HAECO (Superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.484e-32
Identity = 68/141 (48.23%), Postives = 86/141 (60.99%), Query Frame = 1
Query:    1 PRVRGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKSTGNAGGRVACGII 411
            P V GTV F+Q+ +  P  + G + GL PG HGFHVH  GD+TNGC S GPHFNP  K HG P+DD RH              A F + D+ + + G ++++GR++VVHA  DDLGKG     E S  TGN G RVACG+I
Sbjct:   13 PGVTGTVWFSQDKESDPCVIKGEIKGLTPGLHGFHVHQYGDSTNGCTSAGPHFNPFNKTHGGPKDDVRHVGDLGNVEAGADGVAHFEIKDHLVKIHGEHTVVGRSLVVHAGTDDLGKGVGEKKEESLKTGNRGARVACGVI 153          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_PODAN (Superoxide dismutase [Cu-Zn] OS=Podospora anserina GN=SOD1 PE=3 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 2.532e-32
Identity = 71/140 (50.71%), Postives = 84/140 (60.00%), Query Frame = 1
Query:    4 RVRGTVSFAQEGD-GPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417
            +V G+V F QE + GPTT++  ++G       G H+H  GD TNGC S GPHFNP GK HG   D+NRH              +  TV DN I L GP S+IGR VVVHA  DDLGKG  E S  TGNAG R ACG+IG+
Sbjct:   13 KVSGSVVFEQETENGPTTITWDITGHDANAKRGMHIHTFGDNTNGCTSAGPHFNPHGKTHGNRTDENRHVGDLGNIETDAQGNSKGTVTDNLIKLIGPESVIGRTVVVHAGTDDLGKGDTEESLKTGNAGARPACGVIGI 152          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 5.640e-32
Identity = 67/140 (47.86%), Postives = 83/140 (59.29%), Query Frame = 1
Query:    4 RVRGTVSFAQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417
            +V G++ F QE +  PT ++  +SG       G H+H  GD TNGC S GPHFNP  K HGAPED NRH              +  TV D+ + L GP S+IGR +VVH   DDLGKG +E S  TGNAG R ACG+IG+
Sbjct:   13 KVTGSIVFEQESESAPTKITWDISGNDANAKRGMHIHTFGDNTNGCTSAGPHFNPHNKTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVHGGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152          
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_CAEEL (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 7.366e-32
Identity = 67/141 (47.52%), Postives = 84/141 (59.57%), Query Frame = 1
Query:    7 VRGTVSFAQEGDGPTTV-SGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKSTGNAGGRVACGIIGL 417
            V GT+   Q+ +    V  G + GL PG HGFHVH  GD+TNGC+S GPHFNP GK HG P+ + RH              A   + D  + L GPN+++GR++VVHA  DDLG+G     E SK TGNAG R ACG+I L
Sbjct:   36 VTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIAL 176          
The following BLAST results are available for this feature:
BLAST of EY756242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
SODC_CLAPU6.662e-3350.00Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea... [more]
SODC_NEUCR8.701e-3351.80Superoxide dismutase [Cu-Zn] OS=Neurospora crassa ... [more]
SODC_BOTFU1.136e-3250.71Superoxide dismutase [Cu-Zn] OS=Botryotinia fuckel... [more]
SODC_ASPOR1.136e-3249.29Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae... [more]
SODC_ASPFL1.136e-3249.29Superoxide dismutase [Cu-Zn] OS=Aspergillus flavus... [more]
SODC_YARLI1.484e-3250.00Superoxide dismutase [Cu-Zn] OS=Yarrowia lipolytic... [more]
SODC_HAECO1.484e-3248.23Superoxide dismutase [Cu-Zn] OS=Haemonchus contort... [more]
SODC_PODAN2.532e-3250.71Superoxide dismutase [Cu-Zn] OS=Podospora anserina... [more]
SODC_COLGL5.640e-3247.86Superoxide dismutase [Cu-Zn] OS=Colletotrichum glo... [more]
SODC_CAEEL7.366e-3247.52Superoxide dismutase [Cu-Zn] OS=Caenorhabditis ele... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-C05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756242 ID=EY756242; Name=EY756242; organism=Citrus sinensis; type=EST; length=561bp
CCACGCGTCCGGGGAACTGTTTCCTTTGCCCAGGAAGGAGATGGTCCAAC
AACTGTATCAGGAAGCCTCTCTGGTCTCAAGCCTGGTCCTCATGGATTCC
ATGTTCATGCTCTTGGAGACACAACAAATGGTTGCATGTCTACTGGACCC
CACTTTAACCCTGCTGGAAAAGAACATGGAGCTCCAGAGGATGATAATCG
TCATGCTGGTGATTTAGGAAATGTCAATGTTGGTGATGATGGTACTGCTA
CTTTTACAGTTGTTGACAATCAGATTCCACTTTCTGGACCAAATTCCATT
ATTGGAAGGGCTGTTGTAGTCCACGCAGATCCCGATGATCTTGGCAAGGG
CGGTCATGAGCTGAGCAAAAGCACTGGAAATGCTGGTGGCAGAGTAGCTT
GCGGCATCATTGGCCTCCAAGGGTGAAGCCTTATCTCATCGGACAATAAT
AAATTCATTTGATATGATGTTTTGAGTGCATTATAGTCCATATATGCTTG
AGTGTGACTTTTCAAGACTATGATCTTGAATAAGAGAAATCTATAACTTT
GTTGTGTAAAA
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