EY756242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 9.231e-59 Identity = 105/139 (75.54%), Postives = 116/139 (83.45%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 423 V+GT+ F EG+G TTV+G++SGL+PG HGFHVHALGD TNGCMSTGPHFNP GK HGAPED NRHA TATFT+ D+QIPLSGPNSI+GRA+VVHADPDDLGKGGHELS STGNAGGRVACGIIGLQG Sbjct: 14 VKGTIFFTHEGNGATTVTGTVSGLRPGLHGFHVHALGDNTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVHADPDDLGKGGHELSLSTGNAGGRVACGIIGLQG 152
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 2.686e-58 Identity = 107/139 (76.98%), Postives = 117/139 (84.17%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 423 V+GT+ FAQEG+G TTV+G++SGLKPG HGFHVHALGDTTNG MSTGPHFNP GK+HGAPED NRHA TATFT+ D QIPLSGPNSI+GRAVVVHADPD LGKGGHELS +TGNAGGRVACGIIGLQG Sbjct: 14 VKGTIFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALGDTTNGSMSTGPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVHADPDVLGKGGHELSLTTGNAGGRVACGIIGLQG 152
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 2.686e-58 Identity = 106/139 (76.26%), Postives = 115/139 (82.73%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 423 V GT F Q G PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHGAPED+ RHA TA+FT+ D QIPL+GP SIIGRAVVVHADPDDLGKGGHELSKSTGNAGGR+ACGIIGLQG Sbjct: 14 VSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 223.402 bits (568), Expect = 5.984e-58 Identity = 106/140 (75.71%), Postives = 117/140 (83.57%), Query Frame = 1 Query: 7 VRGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 423 V GT+ F+QE +G PTTV+G LSGLKPGPHGFHVHALGDTTNGCMSTGPH+NP GK+HGAP+D++RHA TA FT+VD QIPL G SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGRVACGIIGLQG Sbjct: 14 VSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 153
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 7.815e-58 Identity = 104/139 (74.82%), Postives = 116/139 (83.45%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 423 V GT+ F QEG+GPTTV+GSL+GLKPG HGFHVHALGDTTNGC+STG HFNP EHGAPED+NRHA T +F++ D+QIPL+GPNSIIGRAVVVHAD DDLGKGGHELSK+TGNAGGRVACGIIGLQG Sbjct: 14 VTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 6.616e-57 Identity = 104/139 (74.82%), Postives = 111/139 (79.86%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 423 V G + F QE DGPTTV+G LSGL PG HGFHVHALGDTTNGC+STGPH+NPA KEHGAPED+ RHA TA FT+VD QIPL G SIIGRAVVVHADPDDLGKGGHELSKSTGNAGGR+ACG IGLQG Sbjct: 14 VSGVIHFTQEEDGPTTVTGKLSGLAPGLHGFHVHALGDTTNGCLSTGPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQIPLIGSGSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGFIGLQG 152
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 5.998e-50 Identity = 89/137 (64.96%), Postives = 104/137 (75.91%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V G V+ QE DGPTTV+ ++GL PGPHGFH+H GDTTNGC+STGPHFNP G HGAPED+NRHA A T+VDNQIPL+GPN+++GRA VVH DDLGKGGHELS STGNAGGR+ACG++GL Sbjct: 81 VEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGL 217
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 8.660e-49 Identity = 89/137 (64.96%), Postives = 103/137 (75.18%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V G V+ QE DGPTTV+ +SGL PG HGFH+H GDTTNGCMSTGPHFNP K HGAPED+ RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 83 VEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGL 219
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.331e-48 Identity = 89/137 (64.96%), Postives = 102/137 (74.45%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V G V+ +QE DGPTTVS ++GL PG HGFH+H GDTTNGCMSTG HFNP G HGAPEDD RHA A T+VD QIPLSGPN++IGRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 73 VEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 209
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 3.639e-47 Identity = 86/137 (62.77%), Postives = 101/137 (73.72%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V G V+ Q+ GPTTV+ ++GL PGPHGFH+H GDTTNGC+STGPHFNP HGAPED+ RHA A T+VDNQIPL+GPNS++GRA VVH DDLGKGGHELS +TGNAGGR+ACG+IGL Sbjct: 77 VEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213 The following BLAST results are available for this feature:
BLAST of EY756242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756242 ID=EY756242; Name=EY756242; organism=Citrus sinensis; type=EST; length=561bpback to top |