EY756242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37 Identity = 73/136 (53.68%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIG 414 V+G V F Q+ DG TV G + GL G HGFH+H GD TNGC+S GPHFNP K HG+P+D +RH A F D QI L G SIIGR VVH DDLGKGG + S TGNAGGR+ACG+IG Sbjct: 14 VKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHV-GDLGNVTAEGGVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKGGDDESLKTGNAGGRLACGVIG 148
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC1_DICDI (Superoxide dismutase [Cu-Zn] 1 OS=Dictyostelium discoideum GN=sodA PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37 Identity = 73/139 (52.52%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 4 RVRGTVSFAQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 +V G V F QE D P TV+ ++GL+ G HGFHVHA GDTTNGC+S GPHFNP GK HGAP D++RH T+ D I L G ++I+GR +VVHAD DDLGKGG S +TG AG R+ CG+IG+ Sbjct: 13 KVNGVVKFTQENKDSPVTVNYDITGLEKGEHGFHVHAFGDTTNGCVSAGPHFNPFGKNHGAPSDEDRHVGDLGNIVADGESNTKGTISDKIISLFGEHTIVGRTMVVHADQDDLGKGGKPDSLTTGAAGARLGCGVIGV 151
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_PIG (Superoxide dismutase [Cu-Zn] OS=Sus scrofa GN=SOD1 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 1.694e-36 Identity = 70/137 (51.09%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V+GT+ F +G+ V+G++ GL G HGFHVH GD T GC S GPHFNP K+HG P+D RH AT + D+ I LSG +SIIGR +VVH PDDLG+GG+E S TGNAG R+ACG+IG+ Sbjct: 15 VQGTIYFELKGEKTVLVTGTIKGLAEGDHGFHVHQFGDNTQGCTSAGPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 151
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.213e-36 Identity = 71/137 (51.82%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V GT+ F Q+G GP VSG+++GL G HGFHVH D T GC S GPHFNP K+HG P+D RH A ++ D+ I LSG SIIGR +VVH DDLGKG +E S TGNAG R+ACG+IG+ Sbjct: 15 VEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLIALSGDYSIIGRTMVVHEKRDDLGKGDNEESTQTGNAGSRLACGVIGI 151
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 2.890e-36 Identity = 71/137 (51.82%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V G + F Q+G GP V+G ++GL G HGFHVH GD TNGC S G HFNP GK+HG P+D +RH A + D+ I L+GP+ IIGR +VVHA DDLG+GG SK TGNAG R+ACG+IG+ Sbjct: 16 VEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHV-GDLGNVTAKGGVAEVEIEDSVISLTGPHCIIGRTMVVHAKSDDLGRGGDNESKLTGNAGPRLACGVIGI 151
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_BOVIN (Superoxide dismutase [Cu-Zn] OS=Bos taurus GN=SOD1 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.890e-36 Identity = 72/137 (52.55%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 7 VRGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAG R+ACG+IG+ Sbjct: 15 VQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.438e-36 Identity = 75/141 (53.19%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 7 VRGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKSTGNAGGRVACGIIGL 417 V G + F Q+ +G PTTV+G + GL PG HGFH+H GDTTNGC+S GPHFNP K HG D+ RH TA ++ D I L GPNSIIGR++VVHAD DDLGKG + S TGNAG RVACGI+ + Sbjct: 14 VSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGKGVGAKKDESLKTGNAGARVACGIVAI 154
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 6.438e-36 Identity = 71/138 (51.45%), Postives = 87/138 (63.04%), Query Frame = 1 Query: 7 VRGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V+GT+ F Q+ G P +SG ++GL G HGFHVH GD T GC S GPHFNP K+HG P D+ RH A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 15 VQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC5_DICDI (Superoxide dismutase [Cu-Zn] 5 OS=Dictyostelium discoideum GN=sodE PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.434e-35 Identity = 72/138 (52.17%), Postives = 87/138 (63.04%), Query Frame = 1 Query: 7 VRGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V G ++F Q + P +SG +SGLK G HGFHVH GDTTNGC+S G HFNP KEHG+P D+NRH + + DN I L G NSIIGR++VVH DDLG+G + SK TGNAG R+ CGII L Sbjct: 12 VDGIINFKQNDNKSPVIISGVISGLKEGKHGFHVHEFGDTTNGCLSAGAHFNPFKKEHGSPNDENRHVGDLGNIESNKDKKSIINITDNIITLFGQNSIIGRSIVVHDKEDDLGRGNSQDSKITGNAGSRLGCGIIAL 149
BLAST of EY756242 vs. ExPASy Swiss-Prot
Match: SODC_RAT (Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod1 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.446e-35 Identity = 70/138 (50.72%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 7 VRGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 417 V+G + F Q+ G P VSG ++GL G HGFHVH GD T GC + GPHFNP K+HG P D+ RH A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 15 VQGVIHFEQKASGEPVVVSGQITGLTEGEHGFHVHQYGDNTQGCTTAGPHFNPHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152 The following BLAST results are available for this feature:
BLAST of EY756242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756242 ID=EY756242; Name=EY756242; organism=Citrus sinensis; type=EST; length=561bpback to top |