EY756240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.199e-53 Identity = 111/228 (48.68%), Postives = 139/228 (60.96%), Query Frame = 3 Query: 117 MNRHHDPNPFDEEEVNPFSNGPAAPASRS--------------QVPSVTS---------EPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCI 731 M +D NPF+E++VNPFS A VPSV+S EP FG ATVDIPLD+ + K +E+EL + EA+L A +AG+ +++NWPPF P+IHHDI+ EIP H QR+QY+AFAS+ G+ CL +NVIAV W+KG GVKI+ LA IY + GVP +Y LWYRPLY AMRTDSALK FFLVYL HI FC+ Sbjct: 1 MAGRYDSNPFEEDDVNPFSEQARGKAGGQPSYGGGAFYMPNPRNVPSVSSNSRLSPLPPEPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCV 224
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSI (Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.899e-53 Identity = 110/228 (48.25%), Postives = 139/228 (60.96%), Query Frame = 3 Query: 117 MNRHHDPNPFDEEEVNPFSNGPAAPASRS--------------QVPSVTS---------EPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCI 731 M +D NPF+E++VNPFS A VPS++S EP FG ATVDIPLD+ + K +E+EL + EA+L A +AG+ +++NWPPF P+IHHDI+ EIP H QR+QY+AFAS+ G+ CL +NVIAV W+KG GVKI+ LA IY + GVP +Y LWYRPLY AMRTDSALK FFLVYL HI FC+ Sbjct: 1 MAGRYDSNPFEEDDVNPFSEQARGKAGGQPSYGGGAFYMPNPRNVPSMSSNSRLSPLPPEPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCV 224
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.861e-52 Identity = 107/223 (47.98%), Postives = 135/223 (60.54%), Query Frame = 3 Query: 138 NPFDE---EEVNPFSN-----GPAAPAS-----------RSQVPSVTS------EPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCI 731 NPF+E +EVNPF++ G A +S R P T EP F + VDIP+D + K +E+EL + EA+L A +AG+ +D+NWPPFFPIIH+DI EIP+H QR QY+AFAS G+VLCL +N+I V WIKG G KI+FLA IY +LG P +Y LWYRPLYRAMR +SALK WFFL YL+HI FC+ Sbjct: 9 NPFEEGGGDEVNPFADKASKGGSAGQSSYSGGAFYTTQSRPSAPPATHLSPLPPEPADFYNDFSTPVDIPMDTSKDMKTREKELLAKEAELNRREKEIKRREEAAARAGIVLEDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICVTAAWIKGEGPKIWFLAVIYFILGCPGAYYLWYRPLYRAMRNESALKFGWFFLFYLVHIAFCV 231
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM3_MOUSE (Secretory carrier-associated membrane protein 3 OS=Mus musculus GN=Scamp3 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.956e-13 Identity = 63/221 (28.51%), Postives = 88/221 (39.82%), Query Frame = 3 Query: 138 NPFDEEEVNPFSNGPA---APASRSQVPSVTS-------EPIGFGQ------KYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPF------FPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCW-IKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCI 731 NPF+ E P PA AP PSV S EP +G AT ++ L E +K EL E +L + G T NWPP P DIS EIP Q+ + W L L+ N A + + + G F L+ ++ LL P S+ WYRP+Y+A R+DS+ FF ++ + F + Sbjct: 42 NPFENREPPPAYEPPAPAPAPLPPPSAPSVQSSRKLSPTEPRNYGSYSTQASAAAATAEL-LKKQEELNRKAEELDRRERELQH-----------VALGGAGTRQNNWPPLPSFCPVKPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFFACLARFCVDTGSGSGFGLSMLWLLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVFFV 250
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM4_MOUSE (Secretory carrier-associated membrane protein 4 OS=Mus musculus GN=Scamp4 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 40/121 (33.06%), Postives = 56/121 (46.28%), Query Frame = 3 Query: 414 PPFFPI---IHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCIXXXXXXXXSSWG 767 PPF P+ + D S EIP+ Q L + W L N++A + WI GG F LA ++ +L P SY W+RP Y+A R DS+ FF ++ F + S WG Sbjct: 12 PPFLPLKPCFYQDFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLVACLAWWIAGGAGANFGLALLWLVLFTPCSYVCWFRPAYKAFRADSSFNFMTFFFIF--GAQFVLTVIQAIGFSGWG 130
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM3_HUMAN (Secretory carrier-associated membrane protein 3 OS=Homo sapiens GN=SCAMP3 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12 Identity = 61/216 (28.24%), Postives = 86/216 (39.81%), Query Frame = 3 Query: 138 NPFDEEEVNPFSNGPA-APASRSQVPSVT-------SEPIGFGQ------KYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPF------FPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWI----KGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLI 713 NPF+ E P PA AP PS+ +EP +G AT ++ L E +K EL E +L G T NWPP P DIS EIP Q+ + W L L+ N +A + + G G F L+ ++ LL P S+ WYRP+Y+A R+DS+ FF ++ + Sbjct: 42 NPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAEL-LKKQEELNRKAEELDRRERELQHAAL-----------GGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFCVETNNGAG---FGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFV 242
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM4_PONAB (Secretory carrier-associated membrane protein 4 OS=Pongo abelii GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.594e-11 Identity = 42/128 (32.81%), Postives = 60/128 (46.88%), Query Frame = 3 Query: 402 DRNWPP---FFPI---IHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCIXXXXXXXXSSWG 767 + N+PP F P+ + + S EIP+ Q L + W L N+IA + WI GG F LA ++ LL P SY W+RP+Y+A R DS+ FF ++ F + S WG Sbjct: 5 ENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWIGGGSGTNFGLAFVWLLLFTPCSYVCWFRPVYKAFRADSSFNFMAFFFIF--GAQFVLTVIQAIGFSGWG 130
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM4_RAT (Secretory carrier-associated membrane protein 4 OS=Rattus norvegicus GN=Scamp4 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.082e-11 Identity = 38/117 (32.48%), Postives = 53/117 (45.30%), Query Frame = 3 Query: 417 PFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCIXXXXXXXXSSWG 767 P P + D S EIP+ Q L + W L N++A + WI GG F LA ++ +L P SY W+RP Y+A R DS+ FF ++ F + S WG Sbjct: 16 PLKPCFYQDFSDEIPVEHQVLVKRIYRLWMFYCTTLGVNLVACLAWWIAGGAGANFGLAMLWLVLFTPCSYVCWFRPAYKAFRADSSFNFMAFFFIF--GAQFVLTVIQAIGFSGWG 130
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM4_HUMAN (Secretory carrier-associated membrane protein 4 OS=Homo sapiens GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.638e-11 Identity = 41/128 (32.03%), Postives = 59/128 (46.09%), Query Frame = 3 Query: 402 DRNWPP---FFPI---IHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCIXXXXXXXXSSWG 767 + N+PP F P+ + + S EIP+ Q L + W L N+IA + WI GG F LA ++ LL P Y W+RP+Y+A R DS+ FF ++ F + S WG Sbjct: 5 ENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWIGGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIF--GAQFVLTVIQAIGFSGWG 130
BLAST of EY756240 vs. ExPASy Swiss-Prot
Match: SCAM4_BOVIN (Secretory carrier-associated membrane protein 4 OS=Bos taurus GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.912e-11 Identity = 42/134 (31.34%), Postives = 59/134 (44.03%), Query Frame = 3 Query: 417 PFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYGLWYRPLYRAMRTDSALKVSWFFLVYLIHIGFCIXXXXXXXXSSWGVIDGHPSGIDAFLIPIG 818 P P + + S EIPI Q L + W L N++A + WI GG F LA ++ LL P Y W+RP Y+A R+DS+ FF ++ F + S WG G + I F +G Sbjct: 16 PLKPCFYQNFSDEIPIEHQVLVKRIYRLWLFYCATLGVNLVACLAWWIAGGSGANFGLALLWLLLFSPCGYVCWFRPAYKAFRSDSSFNFMAFFFIF--GAQFILTIIQAVGFSGWGAC-GWLAAIGFFQTSVG 146 The following BLAST results are available for this feature:
BLAST of EY756240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756240 ID=EY756240; Name=EY756240; organism=Citrus sinensis; type=EST; length=938bpback to top |