EY756214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB1_WHEAT (Tubulin beta-1 chain OS=Triticum aestivum GN=TUBB1 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 8.139e-78 Identity = 130/161 (80.75%), Postives = 140/161 (86.96%), Query Frame = 3 Query: 159 LTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 LTVPELTQQM DSKNMM AADP+HGRYLTASAM RGKMSTKEV EQM+NVQNKNSSY VEWIPNNVK++V DIPP GL MAST IGNSTSI EMFRRVSEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD+EG +E E ++ Sbjct: 284 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEEEEELEQ 444 HSP 2 Score: 46.9802 bits (110), Expect = 8.139e-78 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 30.4166 bits (67), Expect = 8.139e-78 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+Q YR Sbjct: 267 MVGFAPLTSRGSQMYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2_ANEPH (Tubulin beta-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBB2 PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.801e-77 Identity = 128/165 (77.58%), Postives = 141/165 (85.45%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEG-YDDEYE 629 G ALTVPELTQQMRD+KNMM AADP+HGRYLTASAM RGKMSTKEV EQM+NVQNKNSSY VEWIPNNVK++V DIPP GLKMA T IGNSTSI EMFRRV +QFTAM++ KAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA+ EG Y+++Y+ Sbjct: 245 GSQQYRALTVPELTQQMRDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLKMACTFIGNSTSIQEMFRRVRDQFTAMFRXKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEPEGXYEEDYD 409 HSP 2 Score: 46.9802 bits (110), Expect = 1.801e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 213 QLNSDLRKLAVNLIPFPRLHFFMVG 237 HSP 3 Score: 32.3426 bits (72), Expect = 1.801e-77 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 235 MVGFAPLTSRGSQQYR 250
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2_MAIZE (Tubulin beta-2 chain OS=Zea mays GN=TUBB2 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.976e-77 Identity = 129/168 (76.79%), Postives = 140/168 (83.33%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G +LTVPELTQQM DSKNMM AADP+HGRYLTASAM RGKMSTKEV EQM+NVQNKNSSY VEWIPNNVK++V DIPP GL M+ST +GNSTSI EMFRRVSEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD+E +E E E Sbjct: 277 GSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEADYEEEEAAAE 444 HSP 2 Score: 46.9802 bits (110), Expect = 3.976e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 32.3426 bits (72), Expect = 3.976e-77 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MVGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB5_GOSHI (Tubulin beta-5 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 5.179e-77 Identity = 129/164 (78.66%), Postives = 139/164 (84.76%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYE 629 G ALTVPELTQQM D+KNMM AADP+HGRYLTA AM RGKMSTKEV EQM+NVQNKNSSY VEWIPNNVK++V DIPP GLKMAST IGNSTSI EMFRRVSEQFTAM++RKAFL YT E MDEMEFTEAES+MNDLV+EY QY DATADDE + E E Sbjct: 277 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTACAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESDMNDLVAEYQQYQDATADDEYEEGEEE 440 HSP 2 Score: 46.9802 bits (110), Expect = 5.179e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 32.3426 bits (72), Expect = 5.179e-77 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MVGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB3_MAIZE (Tubulin beta-3 chain OS=Zea mays GN=TUBB3 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 6.746e-77 Identity = 129/168 (76.79%), Postives = 140/168 (83.33%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATA---DDEGYDDEYEH 632 G ALTVPELTQQM D+KNMM AADP+HGRYLTASAM RGKMSTKEV EQM+NVQNKNSSY VEWIPNNVK++V DIPP GL M+ST +GNSTSI EMFRRVSEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLV+EY QY DATA D+E D E EH Sbjct: 277 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEYDEEEQDGEEEH 444 HSP 2 Score: 46.9802 bits (110), Expect = 6.746e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 32.3426 bits (72), Expect = 6.746e-77 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MVGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB_EUPFO (Tubulin beta chain OS=Euplotes focardii PE=3 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.747e-77 Identity = 127/165 (76.97%), Postives = 143/165 (86.67%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEG-YDDEYE 629 G ALTVPELTQQM D+KNMM A+DP+HGRYLTASAM RG+MSTKEV EQMLNVQNKNSSY VEWIPNN+K++V DIPP GLKM+ST IGNST+I EMF+RV+EQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG +DDE E Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSSTFIGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDDEEE 441 HSP 2 Score: 46.595 bits (109), Expect = 6.747e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMIG 269 HSP 3 Score: 31.9574 bits (71), Expect = 6.747e-77 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MIGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB_NAEGR (Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 8.786e-77 Identity = 127/164 (77.44%), Postives = 141/164 (85.98%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYE 629 G ALTVPELTQQM D+KNMM A+DP+HGRYLTASAM RG+MSTKEV EQMLNVQNKNSSY VEWIPNN+K++V DIPP GLKMA+T IGNST+I EMF+RVSEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG DE E Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMAASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPRGLKMAATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDENE 440 HSP 2 Score: 46.595 bits (109), Expect = 8.786e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFLIG 269 HSP 3 Score: 31.5722 bits (70), Expect = 8.786e-77 Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 2 Query: 113 GFAPLTSRGAQQYR 154 GFAPLTSRG+QQYR Sbjct: 269 GFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB3_ELEIN (Tubulin beta-3 chain OS=Eleusine indica GN=TUBB3 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.788e-77 Identity = 129/165 (78.18%), Postives = 141/165 (85.45%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATA-DDEGYDDEYE 629 G +LTVPELTQQM D+KNMM AADP+HGRYLTASAM RGKMSTKEV EQMLNVQNKNSSY VEWIPNNVK++V DIPP GL M+ST IGNSTSI EMFRRVSEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLV+EY QY DATA ++E YDD+ E Sbjct: 277 GSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLTMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEEEYDDDEE 441 HSP 2 Score: 46.9802 bits (110), Expect = 8.788e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 32.3426 bits (72), Expect = 8.788e-77 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MVGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB1_ANEPH (Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB1 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 8.789e-77 Identity = 128/165 (77.58%), Postives = 142/165 (86.06%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEG-YDDEYE 629 G +LTVPELTQQM D+KNMM AADP+HGRYLTASAM RGKMSTKEV EQM+NVQNKNSSY VEWIPNNVK++V DIPP GLKMA T IGNSTSI EMFRRVS+QFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA+ EG Y+++Y+ Sbjct: 277 GSQQYXSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLKMAVTFIGNSTSIQEMFRRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEREGEYEEDYD 441 HSP 2 Score: 46.9802 bits (110), Expect = 8.789e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 30.4166 bits (67), Expect = 8.789e-77 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQY 151 M GFAPLTSRG+QQY Sbjct: 267 MVGFAPLTSRGSQQY 281
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2_DAUCA (Tubulin beta-2 chain OS=Daucus carota GN=TUBB2 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.789e-77 Identity = 127/161 (78.88%), Postives = 137/161 (85.09%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDD 620 G LTVPELTQQM DSKNMM AADP+HGRYLTASAM RGKMSTKEV EQ+LNVQNKNSSY VEWIPNNVK++V DIPP GL M+ST IGNSTSI EMFRRVSEQFTAM++ KAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA+++ YDD Sbjct: 277 GSQQYRTLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMSSTFIGNSTSIQEMFRRVSEQFTAMFRPKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEDDYDD 437 HSP 2 Score: 46.9802 bits (110), Expect = 8.789e-77 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 32.3426 bits (72), Expect = 8.789e-77 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MVGFAPLTSRGSQQYR 282 The following BLAST results are available for this feature:
BLAST of EY756214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 382
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756214 ID=EY756214; Name=EY756214; organism=Citrus sinensis; type=EST; length=916bpback to top |