EY756214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB_POLAG (Tubulin beta chain OS=Polytomella agilis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 6.035e-75 Identity = 125/164 (76.22%), Postives = 140/164 (85.37%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYE 629 G ALTVPELTQQM D+KNMM AADP+HGRYLTASA+ RG+MSTKEV EQMLNVQNKNSSY VEWIPNNVK++V DIPP GLKM++T IGNST+I EMF+RVSEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DA+A++EG E E Sbjct: 277 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASAEEEGEFGEEE 440 HSP 2 Score: 45.8246 bits (107), Expect = 6.035e-75 Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVNLIPFPRLHF G Sbjct: 245 QLNADLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 30.8018 bits (68), Expect = 6.035e-75 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GF PLTSRG+QQYR Sbjct: 267 MVGFTPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2B_RAT (Tubulin beta-2B chain OS=Rattus norvegicus GN=Tubb2b PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E DE Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2B_MOUSE (Tubulin beta-2B chain OS=Mus musculus GN=Tubb2b PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E DE Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2B_HUMAN (Tubulin beta-2B chain OS=Homo sapiens GN=TUBB2B PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E DE Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2B_BOVIN (Tubulin beta-2B chain OS=Bos taurus GN=TUBB2B PE=1 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E DE Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2A_RAT (Tubulin beta-2A chain OS=Rattus norvegicus GN=Tubb2a PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E DE Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2A_MOUSE (Tubulin beta-2A chain OS=Mus musculus GN=Tubb2a PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E DE Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2A_MACFA (Tubulin beta-2A chain OS=Macaca fascicularis GN=TUBB2A PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E DE Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2A_HUMAN (Tubulin beta-2A chain OS=Homo sapiens GN=TUBB2A PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E DE Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB4_CAEEL (Tubulin beta-4 chain OS=Caenorhabditis elegans GN=tbb-4 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 7.860e-75 Identity = 121/164 (73.78%), Postives = 138/164 (84.15%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYE 629 G +LTVPELTQQM D+KNMM A DP+HGRYLT +AM RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP G+KMA+T +GNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY +ATADDEG DE++ Sbjct: 277 GSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEGEFDEHD 440 HSP 2 Score: 45.0542 bits (105), Expect = 7.860e-75 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 7.860e-75 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282 The following BLAST results are available for this feature:
BLAST of EY756214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 382
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756214 ID=EY756214; Name=EY756214; organism=Citrus sinensis; type=EST; length=916bpback to top |