EY756214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB_PIG (Tubulin beta chain OS=Sus scrofa PE=1 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 6.510e-74 Identity = 122/168 (72.62%), Postives = 138/168 (82.14%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQM D+KNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E DE Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEGEEDE 444 HSP 2 Score: 45.0542 bits (105), Expect = 6.510e-74 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 6.510e-74 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB_PSEAM (Tubulin beta chain OS=Pseudopleuronectes americanus PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 8.479e-74 Identity = 121/162 (74.69%), Postives = 136/162 (83.95%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDE 623 G ALTVPELTQQM D+KNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM+ST IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG +E Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRMSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEGEE 438 HSP 2 Score: 45.0542 bits (105), Expect = 8.479e-74 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 8.479e-74 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 8.479e-74 Identity = 119/162 (73.46%), Postives = 136/162 (83.95%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDE 623 G +LT+PELTQQM D++NMM AADP+HGRYLTASAM RGKMSTKEV +QM+NVQNKNSSY VEWIPNNVK++V DIPPTGL M+ST +GNSTSI EMFRRVSEQFT M+KRKAFL YT E MDEMEFTE +NMNDLV+EY QY DATA D+ D++ Sbjct: 277 GSQQYRSLTIPELTQQMWDARNMMCAADPRHGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTGEGMDEMEFTEVRANMNDLVAEYQQYQDATAVDDHEDED 438 HSP 2 Score: 46.9802 bits (110), Expect = 8.479e-74 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNSDLRKLAVNLIPFPRLHF G Sbjct: 245 QLNSDLRKLAVNLIPFPRLHFFMVG 269 HSP 3 Score: 32.3426 bits (72), Expect = 8.479e-74 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MVGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB4_XENLA (Tubulin beta-4 chain OS=Xenopus laevis GN=tubb4 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 1.104e-73 Identity = 121/164 (73.78%), Postives = 137/164 (83.54%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYE 629 G ALTVPELTQQM D+KNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG +E E Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEGE 440 HSP 2 Score: 45.0542 bits (105), Expect = 1.104e-73 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 1.104e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2_XENLA (Tubulin beta-2 chain OS=Xenopus laevis GN=tubb2 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 1.105e-73 Identity = 121/164 (73.78%), Postives = 137/164 (83.54%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYE 629 G ALTVPELTQQM DSKNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNK+SSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATAD++G +E E Sbjct: 277 GSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKSSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEE 440 HSP 2 Score: 45.0542 bits (105), Expect = 1.105e-73 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 1.105e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2C_RAT (Tubulin beta-2C chain OS=Rattus norvegicus GN=Tubb2c PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.438e-73 Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEG-YDDEYE 629 G ALTVPELTQQM D+KNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG +++E E Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAE 441 HSP 2 Score: 45.0542 bits (105), Expect = 1.438e-73 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 1.438e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2C_MOUSE (Tubulin beta-2C chain OS=Mus musculus GN=Tubb2c PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.438e-73 Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEG-YDDEYE 629 G ALTVPELTQQM D+KNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG +++E E Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAE 441 HSP 2 Score: 45.0542 bits (105), Expect = 1.438e-73 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 1.438e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2C_HUMAN (Tubulin beta-2C chain OS=Homo sapiens GN=TUBB2C PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.438e-73 Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEG-YDDEYE 629 G ALTVPELTQQM D+KNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG +++E E Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAE 441 HSP 2 Score: 45.0542 bits (105), Expect = 1.438e-73 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 1.438e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB2C_BOVIN (Tubulin beta-2C chain OS=Bos taurus GN=TUBB2C PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.438e-73 Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEG-YDDEYE 629 G ALTVPELTQQM D+KNMM A DP+HGRYLT +A+ RG+MS KEV EQMLNVQNKNSSY VEWIPNNVKT V DIPP GLKM++T IGNST+I E+F+R+SEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG +++E E Sbjct: 277 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAE 441 HSP 2 Score: 45.0542 bits (105), Expect = 1.438e-73 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLN+DLRKLAVN++PFPRLHF G Sbjct: 245 QLNADLRKLAVNMVPFPRLHFFMPG 269 HSP 3 Score: 32.7278 bits (73), Expect = 1.438e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 267 MPGFAPLTSRGSQQYR 282
BLAST of EY756214 vs. ExPASy Swiss-Prot
Match: TBB_ACHKL (Tubulin beta chain OS=Achlya klebsiana PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.439e-73 Identity = 126/168 (75.00%), Postives = 140/168 (83.33%), Query Frame = 3 Query: 138 GHSSTGALTVPELTQQMRDSKNMMWAADPQHGRYLTASAMVRGKMSTKEVYEQMLNVQNKNSSYCVEWIPNNVKTTV*DIPPTGLKMASTLIGNSTSIHEMFRRVSEQFTAMYKRKAFLRCYTVECMDEMEFTEAESNMNDLVSEYHQYHDATADDEGYDDEYEHCDE 641 G ALTVPELTQQ D+KNMM AADP+HGRYLTA+ M RG+MSTKEV EQMLNVQNKNSSY VEWIPNN+K +V DIPP GLKM++T IGNST+I EMF+RVSEQFTAM++RKAFL YT E MDEMEFTEAESNMNDLVSEY QY DATA++EG DE E DE Sbjct: 275 GSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSTTFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEMDE 442 HSP 2 Score: 36.5798 bits (83), Expect = 1.439e-73 Identity = 20/25 (80.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 40 QLNSDLRKLAVNLIPFPRLHFLYGG 114 QLNS L KLAVNLIPFPRLHF G Sbjct: 244 QLNSVL-KLAVNLIPFPRLHFFMIG 267 HSP 3 Score: 31.9574 bits (71), Expect = 1.439e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 107 MGGFAPLTSRGAQQYR 154 M GFAPLTSRG+QQYR Sbjct: 265 MIGFAPLTSRGSQQYR 280 The following BLAST results are available for this feature:
BLAST of EY756214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 382
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756214 ID=EY756214; Name=EY756214; organism=Citrus sinensis; type=EST; length=916bpback to top |