EY756211

Overview
NameEY756211
Unique NameEY756211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9350 contig Csv1_Contig9350:302..1178. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_ANOGA (60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 5.409e-43
Identity = 89/183 (48.63%), Postives = 118/183 (64.48%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRY 551
            R G+ VGLTNYAAAYCTGLL+ARR+L+ L +D  Y G  + TGE+Y VEP D     FR  LDVGL +TTTG RVF            IPHS KRF G+S + K  +AE+HR +I+G HVA YM TL E++ E ++  F++YI  GI AD +E +YK  HA+IR  P+ +   + +P+   R+
Sbjct:   85 RYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRIPPSRRNPRRRSPRSGGRW 267          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.685e-42
Identity = 99/230 (43.04%), Postives = 140/230 (60.87%), Query Frame = 3
Query:    3 TRPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSK--DGKQ--LDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSE-------------KPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEED 638
            TR G+ VGLTNY+AAY TGLLLARR+LK   + DE++G  + +GE+Y +E  ++ RRPF+ +LDVG++ TT GNRVF            IPHS+KRF GF+K  DG     + EVHR  IYG HVA YM TL E++PE+YQ+ F+ YI+  ID D +E +Y++    IRA+P   K E             K A  ++ R    KL  E RK ++++++  +   + EE+
Sbjct:   84 TRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTLKEEDPERYQAQFSAYIRNKIDPDSIEKMYEEAFQKIRANPDPVKKEAREVKRVRQGAMIKTAKSQYVRN--VKLDKETRKERVLKKIQMVADKMAEEE 311          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_YEAST (60S ribosomal protein L5 OS=Saccharomyces cerevisiae GN=RPL5 PE=1 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 5.981e-42
Identity = 92/209 (44.02%), Postives = 125/209 (59.81%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA-DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEH-----KRYNLKKLTYEERKAKLVERLNAL 614
            R G+  GLTN+AAAY TGLL+ARR L+ L +D+ Y+G  E  GE    E   D  RPF+  LD+GL +TTTG RVF            +PHS+ RF G+  + +++D E+ R YI+GGHV+ YM  L +D+ E++   F  Y+   IDAD LE +Y   H AIRADP  K +EK   KE      K+Y   KL+ EER A++  ++ AL
Sbjct:   85 RYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAAL 293          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.877e-41
Identity = 97/206 (47.09%), Postives = 124/206 (60.19%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA-DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPA---PKEHKRYNLKKLTYEERKAKLVERLNA 611
            R G+  GL N+ AAY TGLL+ARR L  + + D+YEG  E  GE    E   D  RPF+  LDVGL +T+TG+RVF            IPHS  RF GF  + ++LD E  RKYIYGGHVA YM  L++D+ E+YQ  F+  I  GI++D LE +Y + +A IR DP+ +KS K A     E  +Y  +KLT EERK    ER NA
Sbjct:   85 RYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERK----ERFNA 286          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 96/206 (46.60%), Postives = 124/206 (60.19%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA-DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPA---PKEHKRYNLKKLTYEERKAKLVERLNA 611
            R G+  GL N+ AAY TGLL+ARR L  + + D+YEG  E  GE    E   D  RPF+  LDVGL +T+TG+RVF            IPHS  RF GF  + ++LD E  RKYIYGGHVA YM  L++D+ E+YQ  F+  I  GI++D LE +Y + +A IR DP+ +KS K A     E  ++  +KLT EERK    ER NA
Sbjct:   85 RYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERK----ERFNA 286          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_DICDI (60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.247e-39
Identity = 83/197 (42.13%), Postives = 125/197 (63.45%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKL 593
            R G+ VGLTNYA+ Y TGLLLARR+L  L++ D Y+G  +  G+ + V+P D + RPF+A LDVGL +T+TG +VF            +PH + RFAG++ + K+L+AE  R YI+G HVA+YM+ L  ++ + Y+  F++YIK G+    +E +Y   H AIRA+P        + K+ K  NL K T +++KA++
Sbjct:   85 RFGVKVGLTNYASCYATGLLLARRLLAKLKLADLYKGAEKVDGKVFLVKPVDDKPRPFKANLDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRFAGYNAESKKLNAETLRGYIFGKHVASYMTLLQTEDEDAYKKIFSQYIKNGVAPKDIETIYANAHKAIRANPAPAAKSTKSYKDIKSKNLSKRTLKQKKARV 281          
The following BLAST results are available for this feature:
BLAST of EY756211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
RL5_ANOGA5.409e-4348.6360S ribosomal protein L5 OS=Anopheles gambiae GN=R... [more]
RL5_EIMTE2.685e-4243.0460S ribosomal protein L5 OS=Eimeria tenella GN=RPL... [more]
RL5_YEAST5.981e-4244.0260S ribosomal protein L5 OS=Saccharomyces cerevisi... [more]
RL5B_SCHPO3.877e-4147.0960S ribosomal protein L5-B OS=Schizosaccharomyces ... [more]
RL5A_SCHPO1.473e-4046.6060S ribosomal protein L5-A OS=Schizosaccharomyces ... [more]
RL5_DICDI1.247e-3942.1360S ribosomal protein L5 OS=Dictyostelium discoide... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756211 ID=EY756211; Name=EY756211; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGGACTTGTTGTCGGTCTTACAAACTATGCTGCAGCTTAT
TGCACTGGGCTTCTTTTGGCTCGTCGTGTCTTGAAGATGCTTGAAATGGA
TGATGAGTATGAGGGCAATGTTGAGGCTACCGGAGAGGATTACTCTGTCG
AACCAGCTGATACAAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGGCTC
ATCAAAACAACAACTGGAAACCGTGTCTTTGGTGCTCTGAAGGGAGCATT
AGATGGTGGATTGGACATTCCTCATAGTGACAAGAGGTTTGCTGGTTTTT
CGAAGGATGGCAAGCAGCTGGATGCTGAGGTTCACCGCAAGTATATCTAT
GGTGGACATGTTGCTGCTTACATGAGTACATTGATGGAGGATGAGCCAGA
GAAGTATCAATCTCACTTCACCGAGTACATCAAGAAAGGAATTGATGCTG
ATGGCTTGGAGGCACTGTACAAGAAGGTTCATGCTGCCATTCGTGCAGAT
CCTACAATGAAGAAATCTGAGAAGCCAGCTCCCAAAGAACATAAGAGGTA
TAATTTGAAGAAGCTTACTTACGAGGAAAGGAAGGCGAAGCTGGTTGAAA
GGCTGAATGCCCTTAACTCGGCAGTTGATGAGGAGGACGAATGAAAGCAT
CATAACTAGATATGAATTCAAAATATGTGGCAAATCTGCAGTACACATTT
GTTGTTGCAGTTGCTAGAACCTAAAAATGTTTCTTTGCCCAGTTTTTATT
TTTATTTTTATTTTTAATCATCTTCTGTTTTGGCAATTTTGCAGCTTGGA
TTTCTCATTAGATAAACAGGNTTTGAGATTTTTAGCTTTTGGTGAAATGC
AATTTCATTTTGACTTAAAAAAAAAAA
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