EY756205

Overview
NameEY756205
Unique NameEY756205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7866 contig Csv1_Contig7866:253..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_CAEEL (40S ribosomal protein S14 OS=Caenorhabditis elegans GN=rps-14 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.099e-18
Identity = 48/66 (72.73%), Postives = 52/66 (78.79%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 209
            AAMLAAQDV+ RCK+LGI ALHIKLRA            AQSALRALAR+GMKIGRIEDVTPIP+D
Sbjct:   74 AAMLAAQDVADRCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSD 139          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_TORRU (40S ribosomal protein S14 OS=Tortula ruralis GN=RPS14 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18
Identity = 50/67 (74.63%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITALHI +RA            AQS LRALARSGM+IGRIEDVTPIPTDS
Sbjct:   57 AAMLAAQDVAQRCKELGITALHINVRATGGNKTKTPGPGAQS-LRALARSGMRIGRIEDVTPIPTDS 122          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_SCHPO (40S ribosomal protein S14 OS=Schizosaccharomyces pombe GN=rps14a PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQD + +CKE+GITALHIK+RA            AQ+ALRALAR+GM+IGRIEDVTPIPTDS
Sbjct:   61 AAMLAAQDAAAKCKEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIEDVTPIPTDS 127          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_CANAL (40S ribosomal protein S14 OS=Candida albicans GN=RPS14 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.042e-17
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+ +CKE+GITA+HIKLRA             QSALRALARSG++IGRIEDVTP+P+DS
Sbjct:   56 AAMLAAQDVAAKCKEVGITAVHIKLRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVPSDS 122          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_TRYBB (40S ribosomal protein S14 OS=Trypanosoma brucei brucei GN=RPS14 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.361e-17
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAM+AAQDV  RCKE GI ALH+K+RA            AQ+ALRALAR+GMKIGRIEDVTP+PTDS
Sbjct:   66 AAMMAAQDVVARCKECGINALHVKMRATGGVGTKSPGPGAQAALRALARAGMKIGRIEDVTPVPTDS 132          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_PROCL (40S ribosomal protein S14 OS=Procambarus clarkii GN=RPS14 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.031e-17
Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+++CK LGI  LHIK+RA             QSALRALAR+GMKIGRIEDVTP+P+DS
Sbjct:   73 AAMLAAQDVAEKCKSLGINCLHIKIRATGGNKTKTPGPGGQSALRALARAGMKIGRIEDVTPVPSDS 139          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_KLULA (40S ribosomal protein S14 OS=Kluyveromyces lactis GN=RPS14 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.959e-17
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+ +CKE+GITA+HIK+RA             Q+ALRALARSG++IGRIEDVTP+P+DS
Sbjct:   59 AAMLAAQDVAAKCKEVGITAVHIKIRATGGTRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDS 125          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14B_YEAST (40S ribosomal protein S14-B OS=Saccharomyces cerevisiae GN=RPS14B PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17
Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+ +CKE+GITA+H+K+RA             Q+ALRALARSG++IGRIEDVTP+P+DS
Sbjct:   60 AAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDS 126          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14A_YEAST (40S ribosomal protein S14-A OS=Saccharomyces cerevisiae GN=RPS14A PE=1 SV=5)

HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17
Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+ +CKE+GITA+H+K+RA             Q+ALRALARSG++IGRIEDVTP+P+DS
Sbjct:   59 AAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDS 125          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_TOBAC (40S ribosomal protein S14 (Fragment) OS=Nicotiana tabacum GN=RPS14 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.192e-13
Identity = 41/54 (75.93%), Postives = 41/54 (75.93%), Query Frame = 3
Query:   51 KELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            KELGI ALHIKLRA            AQSALRALARSGMKIGRIEDVTPIPTDS
Sbjct:    1 KELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDS 54          
The following BLAST results are available for this feature:
BLAST of EY756205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
RS14_CAEEL2.099e-1872.7340S ribosomal protein S14 OS=Caenorhabditis elegan... [more]
RS14_TORRU4.677e-1874.6340S ribosomal protein S14 OS=Tortula ruralis GN=RP... [more]
RS14_SCHPO4.677e-1868.6640S ribosomal protein S14 OS=Schizosaccharomyces p... [more]
RS14_CANAL1.042e-1767.1640S ribosomal protein S14 OS=Candida albicans GN=R... [more]
RS14_TRYBB1.361e-1767.1640S ribosomal protein S14 OS=Trypanosoma brucei br... [more]
RS14_PROCL3.031e-1765.6740S ribosomal protein S14 OS=Procambarus clarkii G... [more]
RS14_KLULA3.959e-1764.1840S ribosomal protein S14 OS=Kluyveromyces lactis ... [more]
RS14B_YEAST5.171e-1762.6940S ribosomal protein S14-B OS=Saccharomyces cerev... [more]
RS14A_YEAST5.171e-1762.6940S ribosomal protein S14-A OS=Saccharomyces cerev... [more]
RS14_TOBAC1.192e-1375.9340S ribosomal protein S14 (Fragment) OS=Nicotiana ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756205 ID=EY756205; Name=EY756205; organism=Citrus sinensis; type=EST; length=503bp
CCACGCGTCCGGCAGCTATGCTTGCAGCACAAGATGTTTCTCAACGATGC
AAGGAGCTTGGCATTACTGCTCTTCATATTAAGCTCCGGGCTACTGGGGG
TAACAAAACTAAAACTCCTGGTCCAGGTGCTCAGTCAGCACTTAGAGCTC
TTGCTCGTTCTGGAATGAAGATTGGCCGCATAGAGGATGTGACTCCAATT
CCCACCGACAGTACCCGCAGAAAGGGTGGTACAAGGGGTAGAAGGTTGTA
ATTCTTTTCCTCATACCCATCCATAACGTTCAAGATGATGCCGTGGTTGC
CGAGAGTTTCACTCTCTTCTGTTAGATGCAAGACTTATTTCCCAATTTTG
TTGTTTGGAATGTCTGTAGTCTCAGATTCCTTTGTGTTAGCCTTTCCGAT
CAATTAAGTTTATACAGTGGCAAGACTAATCATTTCTCCATGAGTTTCTG
AATTTTATTGTTTATCTACATTTACAAGTATTGTGTTAAAAAAAAAAAAA
AAA
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