EY756205

Overview
NameEY756205
Unique NameEY756205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7866 contig Csv1_Contig7866:253..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_METKA (30S ribosomal protein S11P OS=Methanopyrus kandleri GN=rps11p PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.541e-12
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 209
            AAM AA+  ++   E GITA+H+K+RA            AQ+A+RALAR+G+KIGRIEDVTPIP D
Sbjct:   59 AAMKAARRAAEEAMEKGITAVHVKVRAPGGHGPKTPGPGAQAAIRALARAGLKIGRIEDVTPIPHD 124          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_IGNH4 (30S ribosomal protein S11P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps11p PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.541e-12
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAM+AA   +Q+  E GITA+HIK+RA            AQ+A+RALARSG  IGRIEDVTP+P D+
Sbjct:   52 AAMIAAARAAQQAMERGITAIHIKVRAPGGYGPKTPGPGAQAAIRALARSGFIIGRIEDVTPLPHDT 118          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_METMJ (30S ribosomal protein S11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps11p PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.543e-12
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAM  A  V+Q  ++ GIT +H+K+RA            AQ+A+RALAR+GM+IGRIEDVTP+P DS
Sbjct:   51 AAMQMAIQVAQNARDKGITGVHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 117          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_METLZ (30S ribosomal protein S11P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps11p PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.116e-11
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAM  A +++Q  K+ GIT LHI++RA            AQ+A+RAL+R+GM+IGRIEDVTP+P DS
Sbjct:   53 AAMQMAINIAQASKDKGITGLHIRVRAPGNGRQRSPGPGAQAAIRALSRAGMRIGRIEDVTPVPHDS 119          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_AERPE (30S ribosomal protein S11P OS=Aeropyrum pernix GN=rps11p PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.903e-11
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAM+AA   +Q+  E GI A+HIK+RA            AQ+A+RALAR+G  IGRIEDVTPIP D+
Sbjct:   55 AAMIAASRAAQKAMERGIAAIHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDT 121          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_PYRKO (30S ribosomal protein S11P OS=Pyrococcus kodakaraensis GN=rps11p PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.246e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 209
            AAM+AA+  ++   E GIT +HIK+RA            AQ+A+RAL+R+G++IGR+EDVTPIP D
Sbjct:   62 AAMIAARRAAEEAMEKGITGVHIKVRAPGGSKSKSPGPGAQAAIRALSRAGLRIGRVEDVTPIPHD 127          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_METHJ (30S ribosomal protein S11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps11p PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.246e-11
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAM  A +V+Q  +E GI  LH+K+RA            AQ+A+RALAR+GM+IG IEDVTP+P DS
Sbjct:   53 AAMQMAGNVAQAAREKGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLIEDVTPVPHDS 119          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_PYRHO (30S ribosomal protein S11P OS=Pyrococcus horikoshii GN=rps11p PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.240e-11
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 209
            AAMLAA+  ++   E GI  +HI++RA            AQ+A+RALAR+G+KIGR+EDVTPIP D
Sbjct:   59 AAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHD 124          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_PYRFU (30S ribosomal protein S11P OS=Pyrococcus furiosus GN=rps11p PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.240e-11
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 209
            AAMLAA+  ++   E GI  +HI++RA            AQ+A+RALAR+G+KIGR+EDVTPIP D
Sbjct:   59 AAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHD 124          
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS11_PYRAB (30S ribosomal protein S11P OS=Pyrococcus abyssi GN=rps11p PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.240e-11
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 209
            AAMLAA+  ++   E GI  +HI++RA            AQ+A+RALAR+G+KIGR+EDVTPIP D
Sbjct:   59 AAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHD 124          
The following BLAST results are available for this feature:
BLAST of EY756205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
RS11_METKA6.541e-1254.5530S ribosomal protein S11P OS=Methanopyrus kandler... [more]
RS11_IGNH46.541e-1255.2230S ribosomal protein S11P OS=Ignicoccus hospitali... [more]
RS11_METMJ8.543e-1252.2430S ribosomal protein S11P OS=Methanoculleus maris... [more]
RS11_METLZ1.116e-1152.2430S ribosomal protein S11P OS=Methanocorpusculum l... [more]
RS11_AERPE1.903e-1153.7330S ribosomal protein S11P OS=Aeropyrum pernix GN=... [more]
RS11_PYRKO3.246e-1150.0030S ribosomal protein S11P OS=Pyrococcus kodakarae... [more]
RS11_METHJ3.246e-1152.2430S ribosomal protein S11P OS=Methanospirillum hun... [more]
RS11_PYRHO4.240e-1151.5230S ribosomal protein S11P OS=Pyrococcus horikoshi... [more]
RS11_PYRFU4.240e-1151.5230S ribosomal protein S11P OS=Pyrococcus furiosus ... [more]
RS11_PYRAB4.240e-1151.5230S ribosomal protein S11P OS=Pyrococcus abyssi GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756205 ID=EY756205; Name=EY756205; organism=Citrus sinensis; type=EST; length=503bp
CCACGCGTCCGGCAGCTATGCTTGCAGCACAAGATGTTTCTCAACGATGC
AAGGAGCTTGGCATTACTGCTCTTCATATTAAGCTCCGGGCTACTGGGGG
TAACAAAACTAAAACTCCTGGTCCAGGTGCTCAGTCAGCACTTAGAGCTC
TTGCTCGTTCTGGAATGAAGATTGGCCGCATAGAGGATGTGACTCCAATT
CCCACCGACAGTACCCGCAGAAAGGGTGGTACAAGGGGTAGAAGGTTGTA
ATTCTTTTCCTCATACCCATCCATAACGTTCAAGATGATGCCGTGGTTGC
CGAGAGTTTCACTCTCTTCTGTTAGATGCAAGACTTATTTCCCAATTTTG
TTGTTTGGAATGTCTGTAGTCTCAGATTCCTTTGTGTTAGCCTTTCCGAT
CAATTAAGTTTATACAGTGGCAAGACTAATCATTTCTCCATGAGTTTCTG
AATTTTATTGTTTATCTACATTTACAAGTATTGTGTTAAAAAAAAAAAAA
AAA
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