EY756204

Overview
NameEY756204
Unique NameEY756204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS23_YEAST (40S ribosomal protein S23 OS=Saccharomyces cerevisiae GN=RPS23A PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.088e-53
Identity = 101/133 (75.94%), Postives = 115/133 (86.47%), Query Frame = 2
Query:   71 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            GK RG+ + RKL+ HRR  RWA+ +YKK  LG  +K  PF GSSHAKGIVLEK+GIE+KQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+
Sbjct:    4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALW 136          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS23_SACCA (40S ribosomal protein S23 OS=Saccharomyces castellii GN=RPS23A PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.088e-53
Identity = 101/133 (75.94%), Postives = 115/133 (86.47%), Query Frame = 2
Query:   71 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            GK RG+ + RKL+ HRR  RWA+ +YKK  LG  +K  PF GSSHAKGIVLEK+GIE+KQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+
Sbjct:    4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALW 136          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS23_SACBA (40S ribosomal protein S23 OS=Saccharomyces bayanus GN=RPS23A PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.088e-53
Identity = 101/133 (75.94%), Postives = 115/133 (86.47%), Query Frame = 2
Query:   71 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            GK RG+ + RKL+ HRR  RWA+ +YKK  LG  +K  PF GSSHAKGIVLEK+GIE+KQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+
Sbjct:    4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALW 136          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS23_CANGA (40S ribosomal protein S23 OS=Candida glabrata GN=RPS23 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.088e-53
Identity = 101/133 (75.94%), Postives = 115/133 (86.47%), Query Frame = 2
Query:   71 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            GK RG+ + RKL+ HRR  RWA+ +YKK  LG  +K  PF GSSHAKGIVLEK+GIE+KQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+
Sbjct:    4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALW 136          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS23_ASPFU (40S ribosomal protein S23 OS=Aspergillus fumigatus GN=rps23 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.727e-53
Identity = 102/133 (76.69%), Postives = 113/133 (84.96%), Query Frame = 2
Query:   71 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            GK RG+ A RKL  HRR QRWAD  YKK  LG  +K  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC +VQLIKNGKK+ AFVPNDGCLN+I+ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGV LLAL+
Sbjct:    4 GKPRGLNAARKLSNHRREQRWADLHYKKRLLGTAFKSSPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVKVQLIKNGKKVTAFVPNDGCLNFIDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALW 136          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS23_NEUCR (40S ribosomal protein S23 OS=Neurospora crassa GN=rps-23 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.652e-53
Identity = 101/133 (75.94%), Postives = 114/133 (85.71%), Query Frame = 2
Query:   71 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            GK RG+ A RKL+ +RR QRW+D  YKK  LG  +K  PF GSSHAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGV LLAL+
Sbjct:    4 GKPRGLNAARKLRNNRREQRWSDLHYKKRALGTAFKSSPFGGSSHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALW 136          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS23_SCHPO (40S ribosomal protein S23 OS=Schizosaccharomyces pombe GN=rps23a PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 3.015e-52
Identity = 99/134 (73.88%), Postives = 113/134 (84.33%), Query Frame = 2
Query:   68 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            MGK  G+ A RKL+ HRR +RWAD  YKK  LG  +K  PF GSSHAKGIV+EKIG+EAKQPNSAIRKC RVQLIKNGKK+ AFVP+DGCLN+++ENDEVL++GFGRKG A GDIPGVRFKVVKV+GV L ALF
Sbjct:    1 MGKPAGLNAARKLRNHRREERWADAHYKKRLLGTAYKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALF 134          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS23_DICDI (40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.334e-51
Identity = 96/134 (71.64%), Postives = 110/134 (82.09%), Query Frame = 2
Query:   68 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            MGK  G+   RKL+ HRR QRW DK YKK+H G   K  PF G+SHA GIV+ ++GIEAKQPNSAIRKC RVQL KNGKKI AFVPNDGCLNYI+END+VL+AG GR GH+VGDIPGVRFKVVKVS VSL+A++
Sbjct:    1 MGKPNGLKTARKLRNHRRVQRWNDKLYKKAHFGTALKANPFGGASHASGIVVSRLGIEAKQPNSAIRKCVRVQLKKNGKKITAFVPNDGCLNYIQENDKVLVAGLGRSGHSVGDIPGVRFKVVKVSSVSLIAIY 134          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_TETTH (40S ribosomal protein S12 OS=Tetrahymena thermophila PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.354e-51
Identity = 95/133 (71.43%), Postives = 110/133 (82.71%), Query Frame = 2
Query:   68 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 466
            +GK RG+ AGRKL  HR+ QRWAD  + K  LG+ W+ PF G+SHAKG+V EKIGIE+KQPNSA+RKC RV L KN KKIAAFVP DGCLN++ ENDEVL+AG GR+GHAVGDIPGVRFKVV V G+SLLALF
Sbjct:    3 VGKPRGIRAGRKLARHRKDQRWADNDFNKRLLGSRWRNPFMGASHAKGLVTEKIGIESKQPNSAVRKCVRVLLRKNSKKIAAFVPMDGCLNFLAENDEVLVAGLGRQGHAVGDIPGVRFKVVCVKGISLLALF 135          
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_PICTO (30S ribosomal protein S12P OS=Picrophilus torridus GN=rps12p PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.041e-36
Identity = 72/126 (57.14%), Postives = 98/126 (77.78%), Query Frame = 2
Query:   83 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 454
            G+ AG+KL   R+T RW+D+ YK+  L  + K  P  G+  AKGIV+EK+GIEAKQPNS IRKC ++QLIKNG++++AF P DG +NYI+E+DEV++ G  GR G + GDIPGVR+KV+KV+G+SL
Sbjct:    4 GLNAGKKLMKSRKTYRWSDRDYKRRVLNLKKKSDPLEGAPQAKGIVIEKVGIEAKQPNSGIRKCVKIQLIKNGRQLSAFAPGDGAINYIDEHDEVVVEGIGGRMGRSKGDIPGVRYKVIKVNGISL 129          
The following BLAST results are available for this feature:
BLAST of EY756204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
RS23_YEAST2.088e-5375.9440S ribosomal protein S23 OS=Saccharomyces cerevis... [more]
RS23_SACCA2.088e-5375.9440S ribosomal protein S23 OS=Saccharomyces castell... [more]
RS23_SACBA2.088e-5375.9440S ribosomal protein S23 OS=Saccharomyces bayanus... [more]
RS23_CANGA2.088e-5375.9440S ribosomal protein S23 OS=Candida glabrata GN=R... [more]
RS23_ASPFU2.727e-5376.6940S ribosomal protein S23 OS=Aspergillus fumigatus... [more]
RS23_NEUCR4.652e-5375.9440S ribosomal protein S23 OS=Neurospora crassa GN=... [more]
RS23_SCHPO3.015e-5273.8840S ribosomal protein S23 OS=Schizosaccharomyces p... [more]
RS23_DICDI3.334e-5171.6440S ribosomal protein S23 OS=Dictyostelium discoid... [more]
RS12_TETTH4.354e-5171.4340S ribosomal protein S12 OS=Tetrahymena thermophi... [more]
RS12_PICTO1.041e-3657.1430S ribosomal protein S12P OS=Picrophilus torridus... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756204 ID=EY756204; Name=EY756204; organism=Citrus sinensis; type=EST; length=765bp
CCACGCGTCCGCTTCGCCTTAACTTCTACACAGCCTCGTAGCAGTCGAGT
AACTACAATCAGGAATCATGGGGAAGACACGTGGTATGGGAGCTGGTCGC
AAGCTGAAGACTCACCGTAGGACTCAAAGGTGGGCTGATAAGTCATACAA
AAAGTCTCACCTTGGCAATGAGTGGAAGAAGCCATTTGCTGGTTCTTCCC
ATGCTAAAGGAATTGTTCTTGAGAAGATAGGTATTGAAGCTAAGCAGCCT
AACTCTGCTATTCGTAAGTGTGCTAGAGTTCAACTTATCAAAAACGGAAA
GAAGATTGCCGCTTTTGTTCCAAATGATGGTTGCTTGAACTATATTGAAG
AAAATGATGAGGTGTTGATTGCTGGATTTGGACGTAAGGGACATGCGGTC
GGTGATATTCCTGGTGTCAGGTTCAAGGTTGTGAAGGTCTCTGGTGTCTC
TCTCTTGGCTCTCTTCAAAGAGAAGAAAGAGAAGCCCAGGTCTTAAGAGA
AGAGACCTGTCTTAACCTGCAAACTCTTTGATAGTTCTTTTTGATATTCC
CAGTGTCAGGTTCAAGGTTGTGAAGGTCTCTGGTGTCTCTCTCTTGGCTC
TCTTCAAAGAGAAGAAGGAGAAACCCANNGTCTAAGAGAAGAGACCCTGT
CTAACCTGCAAACTCTTTGATAGNTATTTTAAAGAATNNCGGATGTCACT
TTTTGTTATCGAGTGGATTTTATGAAACATTTTTTATCAATTGTCTAGNC
AATGTATTGCTGTGG
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